Gene Information

Name : TK90_0115 (TK90_0115)
Accession : YP_003459367.1
Strain : Thioalkalivibrio sp. K90mix
Genome accession: NC_013889
Putative virulence/resistance : Unknown
Product : heat shock protein HslVU, ATPase HslU
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1220
EC number : -
Position : 122438 - 123772 bp
Length : 1335 bp
Strand : -
Note : KEGG: aeh:Mlg_0067 ATP-dependent protease ATP-binding subunit HslU; TIGRFAM: heat shock protein HslVU, ATPase HslU; PFAM: ATPase AAA; SMART: ATPase AAA

DNA sequence :
ATGACCGACATGACCCCCCGCGAGATTGTCCAGGAACTGGACCGCTACATCATCGGCCAGGACGAGGCCAAGCGCTCCGT
CGCCGTCGCCCTGCGCAACCGCTGGCGCCGCCGCCAGCTGCCGCCGGAGCTGCAGCCGGAAGTCACGCCCAAAAACATCC
TGATGATCGGCCCGACCGGTGTCGGCAAGACCGAGATCGCCCGCCGCCTGGCGAAGCTGGCGCGTGCTCCCTTCATCAAG
ATCGAGGCGACCAAGTTCACCGAGGTCGGCTATGTCGGCCGGGACGTCGAGTCAATCATCCGCGACCTGGCCGAGGCCGC
GGTCAAGCAGCTGCGCGACGAGGCCATCAAGGAAAACCGCGTCAAAGCCGAAGACGCGGCGGAGGAGCGCATCCTCGATG
CCCTGCTCCCGCGCCCGCGCAACGCCGGTTTCACCGAATCCGCGCAGGACGACTCCAACAGCGAAACCCGCCAGAAGCTG
CGCAAACGCCTGCGTGAGGGTGACCTGGACGAGCGCGAGATCGACATCGAGGTGCAGCAGAACCCGCACGGCGTCGAGAT
CATGACCCCGCCGGGCATGGAAGAGATGGCCAGCCAGCTGCAGTCGATGTTCCAGAACCTCGGCGGCCAGAAGACCCGTT
CGCGCCGGCTGCAGATCGCCGAGGCACGCAAACTGCTGATCGAGGAAGAGGCCGCGCGCCTGATCAATGACGAAGAACTC
AAGGAACGCGCGATCGAACGTGTCGAGCAAAGCGGCATTGTCTTTCTCGACGAGATCGACAAGGTCGCCAAGGGCAGCGA
CAAGGGCAGCAGCGGCGAGGTCTCGCGCGAGGGCGTGCAGCGCGACCTGCTGCCGCTGATCGAGGGCACCACCGTCTCCA
CCAAACTGGGCATGGTCCGTACCGACCATATCCTGTTCATCGCCTCCGGCGCCTTCCACCTGTCCAAGCCGTCCGACCTC
GTGCCGGAACTGCAGGGACGCCTGCCGATCCGCGTAGAACTGGATGCCCTGTCCGCCGATGCCTTCGTGCGCATCCTGAC
GGAGCCCACCGCCTCGCTGACCGAGCAGTACGTGGAGCTGATGAAGACCGAAGGCGTGGAACTGCGCTTCGAGGAAGACG
GCGTGCGCCGCCTCGCCGAGATCGCCTTTGATGTGAACGCGCGCACCGAGAACATCGGCGCCCGCCGCCTGCACACCGTG
CTCGAACGCCTGCTGCAGGACGTCGCCTACCGCGCCCCGGACGTCGACGGCGCCGTCATCGTGGACCGCGCCTTCGTCGA
CGAACGCCTCGCCGACCTGGTCGAAAACGAAGACCTCTCGCGCTACATCCTCTAA

Protein sequence :
MTDMTPREIVQELDRYIIGQDEAKRSVAVALRNRWRRRQLPPELQPEVTPKNILMIGPTGVGKTEIARRLAKLARAPFIK
IEATKFTEVGYVGRDVESIIRDLAEAAVKQLRDEAIKENRVKAEDAAEERILDALLPRPRNAGFTESAQDDSNSETRQKL
RKRLREGDLDEREIDIEVQQNPHGVEIMTPPGMEEMASQLQSMFQNLGGQKTRSRRLQIAEARKLLIEEEAARLINDEEL
KERAIERVEQSGIVFLDEIDKVAKGSDKGSSGEVSREGVQRDLLPLIEGTTVSTKLGMVRTDHILFIASGAFHLSKPSDL
VPELQGRLPIRVELDALSADAFVRILTEPTASLTEQYVELMKTEGVELRFEEDGVRRLAEIAFDVNARTENIGARRLHTV
LERLLQDVAYRAPDVDGAVIVDRAFVDERLADLVENEDLSRYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 1e-103 48