Gene Information

Name : TK90_1067 (TK90_1067)
Accession : YP_003460315.1
Strain : Thioalkalivibrio sp. K90mix
Genome accession: NC_013889
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1128119 - 1128829 bp
Length : 711 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hch:HCH_04952 lysophospholipase L1 biosynthesis ABC transporter ATPase

DNA sequence : 
ATGGATGCATCCTCATCTTCGGTTCTGGAAGCCCGCGACCTGCAACAGCGGATCGCCGGCCCCAGCGGTGTACTGGATAT
TCTGCGCGGAGTCTCGCTCTCGGTTCACACCGGCGAGACCGTTGCCATCCTCGGCGCCTCCGGCTCTGGCAAGTCCACAT
TGCTGGGACTTCTAGCAGGTCTGGACGCCCCAAGTGCCGGAGAAGTTCGCTTGCTGGGGCAAACGATCAGTGAGCTGGAC
GAGGATGGCCGGGCGGCCCTGCGCGCCGGGCGCGTCGGCTTTGTTTTCCAGTCGTTCCAGCTCCTCCCGGCACTGACGGC
CTTCGAGAACGTGCTCCTCCCGCTTGAACTGAACCCCGAGCACGAGGCGCGCTCGCAAACCGAGATCTCCGCCTGGGCCC
GCGACGCGCTGAAACGCGTCGGGCTGAGCGAGCGCGAAGCCCACTACCCGCACCAGCTCTCGGGCGGCGAGCAGCAGCGC
GTCGCCATTGCCCGCGCGATCGTGGATCGCCCCGCCGTGTTGTTCGCCGACGAGCCCACCGGCAATCTCGACGGCCAGAC
CGGTAGCCGCATCATCGAACTGCTGTTCAGCCTGGCCCGACAACCGGATGACCACGGTCAGCGCACGGCGCTGATCCTGG
TGACACACGACGCCGATCTCGCGCAGCAATGCGACCGCATCCTCCATATCCAGGACGGCGTGCTGGCATGA

Protein sequence : 
MDASSSSVLEARDLQQRIAGPSGVLDILRGVSLSVHTGETVAILGASGSGKSTLLGLLAGLDAPSAGEVRLLGQTISELD
EDGRAALRAGRVGFVFQSFQLLPALTAFENVLLPLELNPEHEARSQTEISAWARDALKRVGLSEREAHYPHQLSGGEQQR
VAIARAIVDRPAVLFADEPTGNLDGQTGSRIIELLFSLARQPDDHGQRTALILVTHDADLAQQCDRILHIQDGVLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-20 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-21 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-21 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-21 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TK90_1067 YP_003460315.1 ABC transporter NC_008702.1.4606598. Protein 1e-24 47
TK90_1067 YP_003460315.1 ABC transporter NC_012469.1.7686878. Protein 2e-24 43