Gene Information

Name : MFS40622_0517 (MFS40622_0517)
Accession : YP_003457945.1
Strain : Methanocaldococcus sp. FS406-22
Genome accession: NC_013887
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 499507 - 500181 bp
Length : 675 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ1508 ABC transporter ATP-binding protein

DNA sequence : 
TTGATAGAAGCTAAAAACATCTGGAAAATCTATGGTAGAGGAGAAGCAAAAACTATAGCTTTAAAAAATATTAATTTGGA
GATTGAAGAAGGGGAATTTCTTATGATTATGGGGCCGAGTGGTTGTGGAAAATCTACTCTATTAAATATTTTGGCTCTCT
TAGATACTCCAACAAAGGGAGAAGTTTATTATAAAGGGAGAAGAACGAGCTCAATGAGTGAAAATGAAAGAGCTATTTTT
AGGAGAAAGGTTAGTGGATTTATCTTTCAGCAATTCCACTTAATAAAAACACTAACTGCCTTAGAAAATGTGGAATTGCC
AATGATGTTGGATGAGAAAGATAAAAGTTATAGGAGGAAGAGGGCAAAAAAGCTTTTGGAGATGGTTGGTTTGGGAGATA
GATTAAATCATTATCCTTATCAATTAAGTGGAGGACAACAACAAAGAGTGGCTATAGCAAGAGCTTTAGCAAACAACCCA
AAGATAATATTTGCTGACGAGCCAACAGGGAATTTAGATAGTAAAAGTGGAATAGCTGTTATGAATATTTTAAAGGAACT
GAATGAAAAAGGAATAACTATAGTTATGGTTACACATGAGCAGGAATTGACAAAATATGCCTCAAAGATTGTTAAGTTGA
GAGATGGGGAGATAGTTGAGATTGTTGAAAAATAA

Protein sequence : 
MIEAKNIWKIYGRGEAKTIALKNINLEIEEGEFLMIMGPSGCGKSTLLNILALLDTPTKGEVYYKGRRTSSMSENERAIF
RRKVSGFIFQQFHLIKTLTALENVELPMMLDEKDKSYRRKRAKKLLEMVGLGDRLNHYPYQLSGGQQQRVAIARALANNP
KIIFADEPTGNLDSKSGIAVMNILKELNEKGITIVMVTHEQELTKYASKIVKLRDGEIVEIVEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-39 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-40 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MFS40622_0517 YP_003457945.1 ABC transporter NC_012469.1.7686878. Protein 1e-50 53
MFS40622_0517 YP_003457945.1 ABC transporter CP001581.1.gene798.p Protein 6e-43 47
MFS40622_0517 YP_003457945.1 ABC transporter NC_008702.1.4606598. Protein 5e-38 46
MFS40622_0517 YP_003457945.1 ABC transporter CP001581.1.gene598.p Protein 7e-41 45
MFS40622_0517 YP_003457945.1 ABC transporter NC_012469.1.7685735. Protein 1e-39 42