Gene Information

Name : MFS40622_0470 (MFS40622_0470)
Accession : YP_003457898.1
Strain : Methanocaldococcus sp. FS406-22
Genome accession: NC_013887
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 454651 - 454851 bp
Length : 201 bp
Strand : -
Note : PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mja:MJ0272 repressor protein, (yorfE)

DNA sequence : 
ATGAAGAATAAACTAAAGATTTATAGAGCTATGTATAACTTAACTCAAGAAGATTTAGCAAAAAAGTTAGGAGTTAGTAG
GCAAACAATCATTGCCATAGAGAAAGGCAAATATGACCCATCTTTAAAATTAGCATTTAAGATAGCAAAGTTTTTTGGAG
TTAAGATTGAAGATATATTTATCTATGAAAAGGATGAATAA

Protein sequence : 
MKNKLKIYRAMYNLTQEDLAKKLGVSRQTIIAIEKGKYDPSLKLAFKIAKFFGVKIEDIFIYEKDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 8e-12 54
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 5e-09 50
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 7e-09 50
SAAV_0790 YP_003281713.1 hypothetical protein Not tested SaPIAv Protein 1.8 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MFS40622_0470 YP_003457898.1 XRE family transcriptional regulator VFG2168 Protein 2e-09 50
MFS40622_0470 YP_003457898.1 XRE family transcriptional regulator VFG2175 Protein 2e-09 50