Gene Information

Name : MFS40622_1643 (MFS40622_1643)
Accession : YP_003459050.1
Strain : Methanocaldococcus sp. FS406-22
Genome accession: NC_013887
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1594635 - 1595915 bp
Length : 1281 bp
Strand : -
Note : TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: mja:MJ1026 thiamine biosynthesis protein ThiC

DNA sequence :
ATGACTCAAATGGATGATGCAAAGAATGGAATTATCACTGAAGAGATGAAAATTGTCGCTGAAAAAGAAAAAATTGATAC
TGAAAAACTTAGAAAGCTTATAGCTAAAGGTTATGTTGTTATCCCAAAAAATGTTAATAGGGATACTGAACCCATAGGAA
TTGGACAGTATTTGAGAACTAAGGTAAATGCAAACATTGGAACTTCCCCAGATTGTGTTGATATAGAGTTAGAGATAAAA
AAGGCAAAAATTGCTGAAAAGTATGGGGCAGATGCAGTAATGGATTTAAGTACTGGGGGTAATTTGGAAGAGATAAGAAA
AGCAATAATGGATGCTGTTAAAATCCCTATTGGAACAGTTCCAATCTACGAAGTTGGAAAATTAGCGAGAGAGAAGTATG
GAAGAGTTATTGATATGAATGAAGATTTAATGTTTAAGGTTATTGAAAAACAGGCAAAGGAAGGAGTAGATTTCATGACT
TTACACTGTGGAGTTACAAAGCAATCCGTTGAGAGATTAAGGAAAAGTGGAAGAATAATGGGTGTTGTAAGTAGAGGGGG
AGCATTTTTAACTGCCTATATCCTATATCACAACGAAGAAAATCCCTTATACAAAAACTTTGATTATTTATTGGAAATTC
TTAAAGAATATGATGTAACCATAAGCTTAGGAGATGGAATGAGACCAGGATGTTTAGCAGATAACACAGACAGAGCTCAA
ATTGAAGAACTCATTACCTTAGGAGAGTTAGTTGAAAGATGTAGGGAGAAAGGGGTTCAATGTATGGTAGAAGGACCTGG
ACACATCCCTATAAACTACATAGAGACAAACATAAGATTGCAAAAAAGTTTATGTAAAAATGCCCCATTCTATGTTTTAG
GGCCAATAGTTACAGATATAGCTCCTGGTTATGACCACATAACATCTGCAATAGGAGGGGCATTAGCTGGTTACTATGGA
GCTGATTTCCTCTGCTATGTAACCCCAAGTGAGCATTTAAGGTTACCAACAATAGAGGACGTCAAAGAAGGAGTTATAGC
CGCTAAAATAGCTGCTCAAGCTGCTGATGTTGCTAAAGGAAATAAATTAGCATGGGAAAAAGAGATAGAGATGGCTTATG
CAAGGAAAAACCATGATTGGGAAAAACAGTTTGAATTAGCAATAGATAAAGAGAAAGCAAAAAAGATGAGGGAGGAGATA
CCTTCAAAGGAAAAGAAAGCATGTTCAATTTGTGGAGATTACTGTGCTTTGTTAATGGTTGAAGAGTTGGGAAAGAGATA
A

Protein sequence :
MTQMDDAKNGIITEEMKIVAEKEKIDTEKLRKLIAKGYVVIPKNVNRDTEPIGIGQYLRTKVNANIGTSPDCVDIELEIK
KAKIAEKYGADAVMDLSTGGNLEEIRKAIMDAVKIPIGTVPIYEVGKLAREKYGRVIDMNEDLMFKVIEKQAKEGVDFMT
LHCGVTKQSVERLRKSGRIMGVVSRGGAFLTAYILYHNEENPLYKNFDYLLEILKEYDVTISLGDGMRPGCLADNTDRAQ
IEELITLGELVERCREKGVQCMVEGPGHIPINYIETNIRLQKSLCKNAPFYVLGPIVTDIAPGYDHITSAIGGALAGYYG
ADFLCYVTPSEHLRLPTIEDVKEGVIAAKIAAQAADVAKGNKLAWEKEIEMAYARKNHDWEKQFELAIDKEKAKKMREEI
PSKEKKACSICGDYCALLMVEELGKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 2e-64 44
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 2e-64 44