Gene Information

Name : MFS40622_1503 (MFS40622_1503)
Accession : YP_003458911.1
Strain : Methanocaldococcus sp. FS406-22
Genome accession: NC_013887
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1475187 - 1476179 bp
Length : 993 bp
Strand : +
Note : TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; KEGG: mja:MJ0677 pyridoxal biosynthesis lyase PdxS

DNA sequence :
ATGAAAAAGGGAACTGACTTATTAAAGAAAGGATTTGCTAAGATGGTTAAGCATGGAGTTGTAATGGATGTTACTAATGT
TGAACAAGCACAAATAGCCGAAGAAGCAGGAGCTGTTGCAGTTATGGCTTTGGAGAGAGTTCCAGCAGATATTAGGGCAG
CTGGTGGAGTTGCGAGAATGTCAGACCCAGCTTTAATTGAGGAGATAATGGATGCTGTCTCAATTCCAGTTATGGCTAAA
TGTAGAATTGGACATACAAAAGAGGCAGAGGTTTTAGAGGCTATTGGAGTAGATATGATTGATGAGAGTGAAGTTTTAAC
CCAAGCAGACCCATTCTTCCACATATATAAGAAGAAGTTTAAAGTTCCATTTGTCTGTGGGGCAAGAAACTTAGGAGAGG
CAGTTAGAAGAATCTGGGAAGGAGCGGCTATGATTAGAACTAAAGGAGAGGCAGGAACTGGAAATATAGTTGAGGCTGTC
AGACATATGAGATTGATGAACGAAGCTATAGCTCAATTGCAGAGAATGACTGATGAAGAGATTTATGGTGTAGCTAAATT
CTATGCAAACAGATATGCAGAGTTAGCTAAAACTGTTAGAGAAGGAATGGGATTGCCAGCAACTGTTTTAGAAAATGAAC
CAATCTATGAGGGCTTTACATTGGCTGAGATTGTTGATGGATTGTATAAAGTTTTATTAGAGGTTAAAAAATTAGGAAGA
TTGCCAGTAGTTAATTTTGCAGCTGGAGGGGTTGCAACTCCAGCAGATGCAGCTTTAATGATGCAACTTGGTTCTGATGG
AGTGTTTGTTGGTTCTGGAATCTTTAAATCAGAGAATCCATTAGAAAGAGCGAGAGCAATTGTTGAAGCTACCTATAATT
ATGATAAGCCAGATGTTGTTGCTGAAGTCAGCAAGAATTTAGGAGAGGCAATGAAAGGGATAGATATAACCCAAATAAGT
GAGGCAGAGAAGATGCAATATAGAGGAGATTAA

Protein sequence :
MKKGTDLLKKGFAKMVKHGVVMDVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDAVSIPVMAK
CRIGHTKEAEVLEAIGVDMIDESEVLTQADPFFHIYKKKFKVPFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIVEAV
RHMRLMNEAIAQLQRMTDEEIYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIVDGLYKVLLEVKKLGR
LPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYNYDKPDVVAEVSKNLGEAMKGIDITQIS
EAEKMQYRGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-64 56
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-64 55
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-64 55