Gene Information

Name : MFS40622_1367 (MFS40622_1367)
Accession : YP_003458779.1
Strain : Methanocaldococcus sp. FS406-22
Genome accession: NC_013887
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1348510 - 1349196 bp
Length : 687 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ0796 ABC transporter, ATP-binding protein

DNA sequence : 
ATGATTAAACTTAAAAATGTGACAAAAACCTATAAAATGGGAGAAGAGATTATTTATGCTTTAAAAAATGTTGATTTAGA
GATAAAAGAGGGGGAGTTTGTTTCTATCATGGGACCTTCTGGAAGTGGAAAATCTACCCTTCTAAATATTATTGGTTGCT
TGGACAAACCAACAGAGGGGGAGGTTTATATTGATAATGTAAAAACAAATGACTTAGATGATGATGAATTAACAAAAATC
AGAAGAAATAAAATTGGTTTTGTCTTTCAGCAATTTAATTTAATCCCAATACTAACTGCTTTGGAGAATGTTGAACTTCC
ACTGATTTTTAAATACAGAGGTGCTATGAGTGAAGAGGAAAGGAAAAAGAGGGCTTTGGAGTGTTTAAAAATGGCTGAGT
TGGATGAGAGGTTTGCCAATCACAAGCCAAATCAATTGAGTGGAGGGCAACAGCAAAGAGTTGCTATAGCAAGGGCTTTA
GCAAACAATCCACCAATTATATTGGCAGATGAACCAACAGGAGCCTTAGATAGCAAAACTGGAGAAAAAATAATGAAACT
ACTAAAAAAACTAAATGAAAACGGAAAAACCATTATTGTTGTAACTCATGACATAAACGTGGCTAAATTTGGAGATAGGA
TTATTTATTTAAAAGATGGGGAGATAGAGAAAGAGGAGAAATTATGA

Protein sequence : 
MIKLKNVTKTYKMGEEIIYALKNVDLEIKEGEFVSIMGPSGSGKSTLLNIIGCLDKPTEGEVYIDNVKTNDLDDDELTKI
RRNKIGFVFQQFNLIPILTALENVELPLIFKYRGAMSEEERKKRALECLKMAELDERFANHKPNQLSGGQQQRVAIARAL
ANNPPIILADEPTGALDSKTGEKIMKLLKKLNENGKTIIVVTHDINVAKFGDRIIYLKDGEIEKEEKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-30 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-32 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-35 42
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 5e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MFS40622_1367 YP_003458779.1 ABC transporter NC_012469.1.7686878. Protein 1e-57 56
MFS40622_1367 YP_003458779.1 ABC transporter NC_008702.1.4606598. Protein 6e-44 48
MFS40622_1367 YP_003458779.1 ABC transporter CP001581.1.gene798.p Protein 1e-41 47
MFS40622_1367 YP_003458779.1 ABC transporter CP001581.1.gene598.p Protein 1e-39 45
MFS40622_1367 YP_003458779.1 ABC transporter NC_012469.1.7685735. Protein 2e-36 44