Gene Information

Name : ctrC (LLO_3151)
Accession : YP_003456599.1
Strain : Legionella longbeachae NSW150
Genome accession: NC_013861
Putative virulence/resistance : Virulence
Product : Capsule polysaccharide export inner-membrane protein ctrC
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 3687633 - 3688412 bp
Length : 780 bp
Strand : -
Note : equals llo3151

DNA sequence : 
ATGCAAAATGTGCATTTCCTAACAATTCAAAAAAGAGTGATTAGTGCTGTGTTATTGCGTGAGATTATCATTCGTTACGG
ACGTAATAATATAGGTTTTTTATGGTTTGCTCTTGAGCCCATGATGTTTACCTTGACCATCACTACTCTTTGGTCTTTTA
TGAAGGGAATGCACGCATCAAATTTGCCAATAACCGCTTTTGCGCTAACAGGTTATGCATCGGTATTATTATGGCGCAAT
ACTGCAACTCGATGCTCCATGGCTATAAAATCAAATGGAGGACTGCTGTACCACTGTTATGTGCAGATTATTCATATATT
TCTGGGACGAATATTAGTAGAGATTGCAGGAGCTACCATTTCTTTTGTTGCCCTCTCTATTTTATTTATCAGTATAGGTT
GGATGGCACCTCCGGCGGACATTTTATTAATCATATTAGGCTGGTTTTTTTTAGCATGGTTTGGAGCAGGCCTTGCTCTT
GTAATTGGCTCAATTAGTGAGCGACATGAGGCCATTGAACGTGTGTGGCATACTATTTCCTATGTGCTTTTTCCTTTGTC
TGGGGCGGCTTTTATGGTGGACTGGCTCCCAAAAACAGTCCAGAAGTTCATTCTCTATTTGCCTATGGTCAATGGTTTGG
AACTGCTTCGTCAAGGAGCATTTGGCACTCAGGTACGCACCCATTACTCCATTCCTTATCTAATTTTTTCGTGTTCTTTT
ATCCTGTTAATTGGTTTGGCTATGACAAATGAGGCCAGTCATCATGTAGGTACAGAATGA

Protein sequence : 
MQNVHFLTIQKRVISAVLLREIIIRYGRNNIGFLWFALEPMMFTLTITTLWSFMKGMHASNLPITAFALTGYASVLLWRN
TATRCSMAIKSNGGLLYHCYVQIIHIFLGRILVEIAGATISFVALSILFISIGWMAPPADILLIILGWFFLAWFGAGLAL
VIGSISERHEAIERVWHTISYVLFPLSGAAFMVDWLPKTVQKFILYLPMVNGLELLRQGAFGTQVRTHYSIPYLIFSCSF
ILLIGLAMTNEASHHVGTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 4e-50 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ctrC YP_003456599.1 Capsule polysaccharide export inner-membrane protein ctrC VFG2564 Protein 2e-66 51
ctrC YP_003456599.1 Capsule polysaccharide export inner-membrane protein ctrC VFG0257 Protein 2e-50 46
ctrC YP_003456599.1 Capsule polysaccharide export inner-membrane protein ctrC VFG0697 Protein 9e-44 41
ctrC YP_003456599.1 Capsule polysaccharide export inner-membrane protein ctrC VFG0685 Protein 9e-44 41