Gene Information

Name : umuC (LLO_1862)
Accession : YP_003455337.1
Strain : Legionella longbeachae NSW150
Genome accession: NC_013861
Putative virulence/resistance : Unknown
Product : DNA polymerase V, subunit C
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0389
EC number : -
Position : 2192333 - 2193592 bp
Length : 1260 bp
Strand : -
Note : equals llo1862

DNA sequence :
ATGTTTGCGCTCATTGATTGTAATAATTTTTACGCCAGTTGTGAGCGGTTGTTTCGTCCTGATTTACGTAATGTGCCGAT
TGTTGTGTTGTCCAACAATGATGGGTGTTGTATAGCGCGCTCTAATGAGGCCAAAGCATTAGGTATAGCGATGGGTGAGC
CTTTTTTTAAAATTAAGAATTTATGCAAACAACATGGCGTCAAAGCGTTTTCTTCAAATTATACTCTCTATGGCAACCTT
AGTCATCGAGTGATGTGCACCATTGAGGAAAGCTGGTCCCATGTAGAAGTGTACTCCATTGATGAGGCCTTTTTAGATTT
AAGCAGCATGCCAGCAGCTTTGCACGATTCCTTTTGTACGATGCTACAAAAGAAAATTTTAAAGCACACTGGAATTCCCA
CCTCCATTGGCATTGGACCGACCAAAACGCTTGCGAAAATAGCTAATCATTGTTGTAAAAAAGTATTTAAAACTCCAGTC
TTTAATATTACGAAGCAGCGTGAGCAGCTCTTAAGGCAGATATCTGTGGGTGATATTTGGGGAGTAGGGCGACAATGGGA
AAAGAAACTAATGGCCCGAGGTATTTACACCGCCCATGATTTGGCATGCTCTAACCCCCATCATTTAAAGAAAAGTTTTA
ATGTAGTATTGATGCGTACAGCAATGGAACTTCAAGGTATTGCTTGCGGAGGACTCGAAGAGATAGAGCCCAAACAAAAC
ATCATGTCATCGAAAAGTTTTGGACAGATGCAAACTGAATTTAATAGTGTGGCGCAATCGGTAAGTAGTCATTGTGCACG
TGCAGTGGAAAAGATGCGCGCACAAGGATTAGTGGCGCAACGCGTGGCTGTGTTTGTTCATACCAATCGATTTCGCGAAG
ATTTGGCCCAGCATTTTCAAGCAATGGAATTTCGTCTGGTCAATGCCAGCGATGATTTGCGCTTAATCACCAAAATTGCC
AAACGGTGTTTGCGCCGTATTTTTAGACCAGGATATTATTATAAGAAAGCAGGGGTTTGCCTTGAGGATTTAATTCCTAA
AGATCCAAGGCAGTTGGATATGTTTCATCAGCCAACTGATGAGCAATTGCACCATACCGAACAACTGATGAGTGTACTGG
ATAAAATCAATCAAAAATATGGTCGAAGCACGATTCGGTTGGCAGCAGAAGGTTACTCCAAACCCTGGGATATGCGCGCC
GAACTTAAGTCTCCAGCCTACACAACGCGCTGGAGTGATGTGCCTCAAGTGGGTTTTTAA

Protein sequence :
MFALIDCNNFYASCERLFRPDLRNVPIVVLSNNDGCCIARSNEAKALGIAMGEPFFKIKNLCKQHGVKAFSSNYTLYGNL
SHRVMCTIEESWSHVEVYSIDEAFLDLSSMPAALHDSFCTMLQKKILKHTGIPTSIGIGPTKTLAKIANHCCKKVFKTPV
FNITKQREQLLRQISVGDIWGVGRQWEKKLMARGIYTAHDLACSNPHHLKKSFNVVLMRTAMELQGIACGGLEEIEPKQN
IMSSKSFGQMQTEFNSVAQSVSSHCARAVEKMRAQGLVAQRVAVFVHTNRFREDLAQHFQAMEFRLVNASDDLRLITKIA
KRCLRRIFRPGYYYKKAGVCLEDLIPKDPRQLDMFHQPTDEQLHHTEQLMSVLDKINQKYGRSTIRLAAEGYSKPWDMRA
ELKSPAYTTRWSDVPQVGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rulB CAI36137.1 nucleotidyltransferase/DNA polymerase Not tested PPHGI-1 Protein 8e-76 46
samB NP_458681.1 UV protection protein Not tested SPI-7 Protein 1e-72 45
umuC NP_807889.1 DNA polymerase V subunit UmuC Not tested SPI-7 Protein 1e-72 45
unnamed ABR13403.1 DNA-directed DNA polymerase Not tested PAGI-5 Protein 2e-54 42