Gene Information

Name : AZL_f00870 (AZL_f00870)
Accession : YP_003453391.1
Strain :
Genome accession: NC_013860
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 106522 - 107421 bp
Length : 900 bp
Strand : +
Note : -

DNA sequence :
GTGAAGTACGCCTTTATTCAGCGGCACCGAGAATTGTGGCCGGTATCCGCTCAGTGTTCGGCTCTGGGTGTCAGCGCCCG
AGGGTTTCGTCAATACCTCTGCCGTGAGGCGACGCCGGACACGGCGCCTTCGGCTCGGAGACGCGTGGGCAACGTGGCCC
TGCTGACGCACATCAAGGCGATCCACGCCGAGACCCGCGGGGCCTATGGCTGGCCCCGGATCTGGCGGGAACTGCGGCAC
CGTCAGGTGCGCGTCGGCAAGGAGCGGGTGCGCCGGATGATGCGCGAACATGCCATCCGGGCGCGGGGCAAGCGGAAGTT
CAAGGCGACAACCGACAGCACCCACGGCCTGCCGGTGTCCGACAACCTGTTGAACCGGGCGTTCCGGCCGGCGCAGCCCG
ATCGAGTGTGGACCGGCGACATCACCTATATCGCCACCGGGGAAGGCTGGCTGTACCTGGCCGTCGTCATCGACCTGTTC
AGCCGGCAGGTTGTCGGTTGGGCGTTGGGCGAGCGCATGACCCGCCAACTCGTAATCGACGCCCTGACCATGGCGTGGTT
CCGGCGCCGGCCGGCCGAGGGCGTGATCTTCCATTCCGATCAAGGCTCGCAATACGCCAGCTCGGATTTCCAGGCGCTCC
TGCGCCAGTACGGCATGCAGGGATCGATGAGCCGCAAGGGCAACTGCTGGGATAACGCGGTGACCGAGACCCTGTTCGGA
TCGCTCAAAGTCGAACGCTTGCATGGCATGCGCTTTGAAACCCGGCGCCACGCCAAGGACGAGATCATCGACTGGCTCGC
CTTCTACAACCACAAGCGGATGCATTCGACCCTGGGCTACACCAGCCCCATGGCATTCGAGGAAACTTGGCGTCGCCAGC
ACGGCGTGCTGGCGGCATAA

Protein sequence :
MKYAFIQRHRELWPVSAQCSALGVSARGFRQYLCREATPDTAPSARRRVGNVALLTHIKAIHAETRGAYGWPRIWRELRH
RQVRVGKERVRRMMREHAIRARGKRKFKATTDSTHGLPVSDNLLNRAFRPAQPDRVWTGDITYIATGEGWLYLAVVIDLF
SRQVVGWALGERMTRQLVIDALTMAWFRRRPAEGVIFHSDQGSQYASSDFQALLRQYGMQGSMSRKGNCWDNAVTETLFG
SLKVERLHGMRFETRRHAKDEIIDWLAFYNHKRMHSTLGYTSPMAFEETWRRQHGVLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 6e-50 46
unnamed AAF09030.1 unknown Not tested SHI-O Protein 6e-50 46
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 6e-50 46
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 6e-50 46
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 9e-50 46
unnamed AAF09022.1 unknown Not tested SHI-O Protein 3e-50 46
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 9e-50 46
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 8e-50 46
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 3e-48 45
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-43 44
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 8e-44 44
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 7e-45 43
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 5e-46 43
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 5e-46 43
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 5e-46 43
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 6e-44 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-44 42
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-44 42
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 1e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZL_f00870 YP_003453391.1 transposase VFG1706 Protein 3e-50 46
AZL_f00870 YP_003453391.1 transposase VFG1631 Protein 4e-45 43