Gene Information

Name : fliI (AZL_d02960)
Accession : YP_003452666.1
Strain :
Genome accession: NC_013858
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 343929 - 345266 bp
Length : 1338 bp
Strand : -
Note : -

DNA sequence :
ATGCCGTTCGACATCGATCAGTTGATCCGTGACATCGACGAGATTCCCGACTGTAGCCGCTACGGCCGCGTCACCGCCGT
GTCGGGCCTGATGGTCGAGGTCGGCGGCATCGAGAAGGAGCTGTCGGTCGGCGGCCGTTGCATCGTCGAGACGCGCGATC
GCCGCCGGGTTCCGTGCGAGGTGGTGGGCTTCCGGCAGGGCCGGGCGCTCGCCATGCCCTTCGGCGCGCTGGACGGGGTC
GGGCTGGGTTGCCGCGCGCTGGTGGCGGGCGACCAGGCGATGATCTATCCCACCGACGCCTGGCTCGGCCGCGTCGTCAA
CGCGCTGGGCGAACCGGTGGACGGCAAGGGGCCGCTGCCCAAGGGGCCGCAGGGCACGCCGATCCGCAACACCCCGCCCA
ACGCCCATTCCCGTGCCCGGGTGGGCGAGAAGCTCGATCTGGGCATCCGCGCCATCAACGCCTTTCTCACCTGCTGCCGC
GGCCAGCGCATGGGCATCTTCGCCGGATCGGGTGTCGGCAAATCCTCGGTCATGTCGATGCTGGCGCGCTTTTCCGCCGC
CGAGGTGGCGGTGATCGGGCTGATCGGCGAGCGCGGCCGCGAGTTGCAGGAATTCATCACCGAGGATCTGGGCGAGGAGG
GTCTGGCCCGCAGCGTCGTCGTCTGCGCCACCTCGGACGAGGCGCCATTGATGCGCAAGCAGGCGGCCTACATGACGCTG
GCGGTGGCCGAGCATTTCCGCGACCAGGGCCGCGACGTGCTGTGCATGATGGACAGCGTCACCCGCTTCGCCATGGCCCA
GCGCGAGATCGGCCTGTCGGCGGGCGAACCGCCGACGACCAAGGGCTATCCGCCGACCGTCTTCGCCGAACTGCCGCGCC
TGCTGGAGCGCGCCGGGCCGGGGGTGGTCGGGTCGGGCACCATCACCGGCCTGTTCACCGTGCTGGTCGACGGCGACGAC
CACAACGAACCGATCGCCGACGCCGTGCGCGGCATCCTCGACGGCCATATCGTGATGGAGCGCCAGATCGGGGAGCGCGG
GCGCTACCCCGCCATCAACATCCTGCGCAGCGTGTCGCGCACCATGCCCGGCTGCAACACGGCGAACGAGAATGAACTGG
TCGGCCATGCCCGGCGCCTGCTGTCCTCCTACGACAACATGGCGGAGATGATCCGGCTCGGCGCCTATCGCCGCGGCACC
GACCCGCAGGTCGACGAGGCGATCCACTTCCAGCCGGCGCTGGAAGCCTTTCTGAAGCAGGGCAAGCGCGAGGCCACCGA
TCTGGAGACCAGCTATGCCATGCTCGCTGAAATCTTTGGGGTGCAGTGGCCGCAATGA

Protein sequence :
MPFDIDQLIRDIDEIPDCSRYGRVTAVSGLMVEVGGIEKELSVGGRCIVETRDRRRVPCEVVGFRQGRALAMPFGALDGV
GLGCRALVAGDQAMIYPTDAWLGRVVNALGEPVDGKGPLPKGPQGTPIRNTPPNAHSRARVGEKLDLGIRAINAFLTCCR
GQRMGIFAGSGVGKSSVMSMLARFSAAEVAVIGLIGERGRELQEFITEDLGEEGLARSVVVCATSDEAPLMRKQAAYMTL
AVAEHFRDQGRDVLCMMDSVTRFAMAQREIGLSAGEPPTTKGYPPTVFAELPRLLERAGPGVVGSGTITGLFTVLVDGDD
HNEPIADAVRGILDGHIVMERQIGERGRYPAINILRSVSRTMPGCNTANENELVGHARRLLSSYDNMAEMIRLGAYRRGT
DPQVDEAIHFQPALEAFLKQGKREATDLETSYAMLAEIFGVQWPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-81 47
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-81 47
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-80 47
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-80 47
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-80 47
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-79 46
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 3e-80 46
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 8e-80 46
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-79 46
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-79 46
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 3e-64 46
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-61 44
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 5e-61 44
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 9e-62 44
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-61 44
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-61 44
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 4e-57 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 5e-58 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 6e-68 41
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 7e-72 41
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-57 41
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 9e-58 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-55 41
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-55 41
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-58 41
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_003452666.1 flagellum-specific ATP synthase VFG2499 Protein 5e-81 48
fliI YP_003452666.1 flagellum-specific ATP synthase VFG1254 Protein 1e-77 47
fliI YP_003452666.1 flagellum-specific ATP synthase VFG2331 Protein 4e-80 46
fliI YP_003452666.1 flagellum-specific ATP synthase VFG2144 Protein 4e-83 45
fliI YP_003452666.1 flagellum-specific ATP synthase VFG0192 Protein 2e-76 44
fliI YP_003452666.1 flagellum-specific ATP synthase VFG0048 Protein 9e-79 44
fliI YP_003452666.1 flagellum-specific ATP synthase VFG0390 Protein 2e-79 44
fliI YP_003452666.1 flagellum-specific ATP synthase VFG0515 Protein 5e-62 44
fliI YP_003452666.1 flagellum-specific ATP synthase VFG2459 Protein 3e-58 41