Gene Information

Name : AZL_c03980 (AZL_c03980)
Accession : YP_003452235.1
Strain :
Genome accession: NC_013857
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 480000 - 480938 bp
Length : 939 bp
Strand : -
Note : -

DNA sequence :
ATGCGTACGCTCTATCGGCAATCGGCCATCTACGCCCGCGAAGGCGTGGAATTGGAACGCTCGCTGCTGGCCGACTGGGT
CGGCAAGGCGGCGGCGCTGATGGCGCCGCTGGCCGAGGCCATTGGCCGGCACGTGCTGGCCGGTTCGGTTCTACACGCGG
ACGACACGCCGGTGCCGGTGCTCGATCCCGGGCGTGGCACGACCAAGACGGGGCGACTGTGGGTCTATCTGCGCGATGAA
CGCCCGCACGCCGGACAAGGGCCGCCGGCGGTGCTGTACCGCTATACCCCCGACCGCAAAGGCGAACATCCGCAACGGGA
GCTGGCCGGTTTCCGTGGGCACCTGCATGCCGACGGCTATGGCGGGTTCGATGCTCTGTACGAAGCCAAGGGCGGCAAAC
CGGCCGCTGTCGCCGAAGTGGCCTGTATGGCTCACGTGCGCCGGAAATTCTTCGACGAGCACACCGAAACCGGCTCGCCC
CTGGCCGCCGACGCGCTGAAACGGATCGGCAGGCTGTTTGACATCGAACGCCCCCTGACCGGCCAGCCCGCCGAGGACCG
CCGCCGGATTCGCCAAGCGGAAGCCCGTCCCGTTCTCGATGAACTGGCCACCTTCCTCGACGCCGCCTTGGTGCGCATCC
CCGGCAAGGGCGACCTGGCCAAGGCGATCCGCTACGCCCGCTCGCGCTGGACGGCACTGACGCGCTACGTGGACGACGGC
CGGTTGGAGAACTCCAACAACGCCGCCGAACGAGCGATCAGGCCGCTGGCCATCGGAAGACGCAACTGGATGTTCGCCGG
TTCCGACGCCGGCGGGGAGCGTGCCGCGGCGATTTATACCATCGTGGAATCCGCCAAACTCAACGGCCTCGATCCTCAGG
CCTACCTGCGACATGTGCTCGACCGCATCGCGGATCACCCGTACGCATCCGGTGAGTGA

Protein sequence :
MRTLYRQSAIYAREGVELERSLLADWVGKAAALMAPLAEAIGRHVLAGSVLHADDTPVPVLDPGRGTTKTGRLWVYLRDE
RPHAGQGPPAVLYRYTPDRKGEHPQRELAGFRGHLHADGYGGFDALYEAKGGKPAAVAEVACMAHVRRKFFDEHTETGSP
LAADALKRIGRLFDIERPLTGQPAEDRRRIRQAEARPVLDELATFLDAALVRIPGKGDLAKAIRYARSRWTALTRYVDDG
RLENSNNAAERAIRPLAIGRRNWMFAGSDAGGERAAAIYTIVESAKLNGLDPQAYLRHVLDRIADHPYASGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-67 51
unnamed AAK00463.1 unknown Not tested SHI-1 Protein 9e-59 47
SF2972 NP_708746.1 hypothetical protein Not tested SHI-1 Protein 3e-56 46
EXB16 ABD94703.1 ISPpu14 transposase Orf3 Not tested ExoU island B Protein 2e-53 43
unnamed AAL67335.1 L0015-like protein Not tested PAI II CFT073 Protein 5e-41 43
RS12 AAP82957.1 transposase Not tested PAPI-2 Protein 3e-47 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZL_c03980 YP_003452235.1 transposase VFG1700 Protein 2e-67 51
AZL_c03980 YP_003452235.1 transposase VFG0634 Protein 1e-56 46