Gene Information

Name : AZL_b03970 (AZL_b03970)
Accession : YP_003451604.1
Strain :
Genome accession: NC_013856
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 448124 - 448828 bp
Length : 705 bp
Strand : -
Note : -

DNA sequence :
GTGAGGAAAGTGTGGCGGCAGTTGCGGCGGGAGGGCTTCGACGTGGCGCGCTGCACGGTGGCTCGCCTGATGCGGTCCAT
GGGCTTGAAGGGGGCGATGCGCGGCAAGGCGGTGCGCACCACGATCAGCGACAAGGCGGCATCTTGCCCGCTCGACCGGG
TGAACCGCCAGTTCCAGGCTTCTCGTCCGAATGCCTTGTGGGTGGCCGATTTCACCTACGTTGCCACATGGCAGGGCTTC
GTCTACGTCGCCTTCGTCATCGACACCTTCGCCCGCCGCATCGTGGGCTGGCGGGTGTCGCGCACCGCCCACGCCGACTT
CGTCCTGGATGCTTTGGAGCAGGCTCTGCATGACCGCCGGCCGACCAAGGGCAGCGGCCTCGTCCATCATTCCGATCGTG
GATCGCAATATCTCGCCATTCGCTACACCGAACGCCTCACCGAAGCCGGCGTCGAGCCCTCCGTCGGCAGCATCGGCGAT
TCCTATGACAACGCTTTGGCCGAGACCATCAACGGCCTTTACAAGACCGAGGTGATCCGCCGCCGCGGGCCGTGGCGCAC
CCTGGAGGCTGTCGAGTTCGCTACCCTGGAATGGGTGGACTGGTTCAACCACCGACGCCTCCTCGAACCCATCGGCAACA
TTCCTCCCGCCGAGGCCGAAGCACGCTATTATGCCCAAACCGAGGACGTCCCTATGGCGGCGTGA

Protein sequence :
MRKVWRQLRREGFDVARCTVARLMRSMGLKGAMRGKAVRTTISDKAASCPLDRVNRQFQASRPNALWVADFTYVATWQGF
VYVAFVIDTFARRIVGWRVSRTAHADFVLDALEQALHDRRPTKGSGLVHHSDRGSQYLAIRYTERLTEAGVEPSVGSIGD
SYDNALAETINGLYKTEVIRRRGPWRTLEAVEFATLEWVDWFNHRRLLEPIGNIPPAEAEARYYAQTEDVPMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 2e-68 67
Z1198 NP_286733.1 transposase Not tested TAI Protein 3e-67 67
Z1638 NP_287141.1 transposase Not tested TAI Protein 3e-67 67
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 9e-68 67
Z1221 NP_286756.1 transposase Not tested TAI Protein 8e-68 67
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 8e-68 67
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 5e-68 67
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 5e-68 67
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 5e-68 67
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 2e-63 66
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 2e-63 66
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 4e-66 66
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 9e-67 66
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 9e-67 66
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 9e-67 66
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 4e-67 66
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-67 66
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 2e-67 66
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 7e-68 66
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 8e-60 65
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 8e-65 64
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 7e-48 62
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 2e-34 52
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 2e-46 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZL_b03970 YP_003451604.1 transposase VFG1602 Protein 5e-65 64
AZL_b03970 YP_003451604.1 transposase VFG1715 Protein 3e-48 62