Gene Information

Name : kdpB (AZL_b02720)
Accession : YP_003451479.1
Strain :
Genome accession: NC_013856
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase ATPase B chain
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : 3.6.3.12
Position : 296444 - 298585 bp
Length : 2142 bp
Strand : -
Note : -

DNA sequence :
ATGCCACCGATGATGCACCGCACTTCGGAGATTTCCCTGTTCGACGCCAGGATCGCCGCCCAGGCGGCCGGCGACGCCAT
CCGCAAGCTCGACCCGCGCGAGCTGGTCAAGAACCCGGTCATCTTCGTGACCGCCGTGGTCGCCGCCCTGTCCACCGTGC
TGGTCCTGCGCGACCTCGCCGGGTTCGGGCATGGCGGTGCCAGCGTCGGCGTCGCCGGCCAGATCGCCGCCTGGCTGTGG
TTCACCGTGCTGTTCGCCAACTTCGCCGAGGCCGTCGCCGAAGGGCGCGGCAAGGCGCAGGCGGCCAGCCTGCGCAAGAC
CAAGACGGAAACCGCCGCCAAGAAGCTGGCGAGCCTCGACGCCGCCACCCACCAGGCGGTGCCGGCGGCCAGCCTGCGCA
CCGGCGACCTCGTGCTGGTCGAGGCCGGCGACGTCATCCCCGGCGACGGCGACGTCGTCGCCGGCATCGCCACGGTGGAC
GAAAGCGCCATCACCGGCGAATCCGCCCCGGTGATCCGCGAATCCGGCGGCGACCGCTCGGCCGTCACCGGCGGCACCCG
GGTGGTGTCGGACCGCATCGTCCTGCGCATCACCGCCAATCCGGGCGAAAGCTTCCTCGACCGCATGATCGCCCTGGTCG
AGGGCGCCAAGCGCCAGAAGACGCCGAACGAGATCGCGCTGAACATCCTGCTGGCGGGCCTGTCGATCATCTTCCTCCTG
GTGGTGATGACCCTGCCGGCCTTCGCCGACTATTCCGGCGCCGCCATCCCGATGGCCTTCCTGATCGCCCTGCTGGTGAC
GCTGATCCCGACGACCATCGGCGGCCTGCTGTCGGCCATCGGCATCGCCGGCATGGACCGCCTCGTCCGCTTCAGCGTCA
TCGCCAAGTCGGGCCGCGCGGTGGAGGCGGCGGGCGACGTCGACGTCCTGCTGCTCGACAAGACCGGCACCATCACGCTG
GGCAACCGCCAGGCGGCCGAGTTCCTCCCGGTCGGCGGCATCGCCGAGCGCGATCTGGCCGAAGCCGCCTTTCTCTCCTC
GCTGGCCGACGACACGCCGGAGGGCAAGTCCATCGTGGCGCTGGCCCAGCAGCGTTTCGGCTTCGATCCGGCCGCGCTCG
ACCGCGCCGGCCTGAGCTTCATCGCCTTCACCGCCCAGACGCGGATGAGCGGGGTGGACGTCGCCGCGACCGGAACGCGG
ATCCGCAAGGGGGCGCCGGACACCATCATGGCGATGATCGGCGCCATGGCGGGCGCCACGGTCGGCGCCCCGGCCGGCGC
CCCCGCCGGTGGGGCATCCGCCGGCCAGCGCGGGGGCGCGGGCGGAAGCGGCCGCGACCTGACGCTGGCGGTGGAACGGG
TCGCCAAGGCCGGCGGCACGCCGCTGGTGGTCGCCCGCGACGGCCGGGCGCTGGGCGTCGTCTATCTCAAGGACATCGTC
AAGCCCGACATCCGCGAGCGCTTCCTGACCCTGCGCAGCATGGGCATCAAGACGGTGATGGTCACCGGCGACAACCCGCT
GACCGCCGCCGCCATCGCCGCCGAGGCCGGAGTGGACGATTTCCTGGCCGAGGCGACACCGGAGCGCAAGCTCGAGCTGA
TCCGCTCCTATCAGGCGGAGGGGCGGCTGGTCGCCATGTGCGGCGACGGGTCGAACGACGCCCCGGCGCTGGCCCAGGCG
GATGTCGGCGTCGCCATGAACACCGGCACCCAGGCGGCGCGCGAGGCCGGCAACATGGTCGATCTGGAAAGCGATCCGAC
CAAGCTGATCGAGATCGTCATGATCGGCAAGCAGCTGCTGATGAGCCGCGGCGCGCTGACCACCTTCTCCATCGCCAACG
ACGTGGCGAAGTACTTCGCCATCATCCCGGCGCTGTTCATCGCCGCCTATCCCCAGTTGCAGGCGCTGAACGTCATGGGG
CTGGCCAGCCCGCAGAGCGCCATCCTGTCGGCCATCATCTTCAACGCGCTGATCATCGTCGCCCTGATCCCGCTGGCGCT
GAAGGGCGTCGCCTACCGCCCGGCCGACGCCGCCAGCCTGCTGCGGCGCAACCTGCTGATCTACGGCCTCGGCGGTCTGG
TGGTGCCCTTCATCGGCATCAAGCTGATCGACGTCGCCATCACCACGCTCGGCCTTGTCTGA

Protein sequence :
MPPMMHRTSEISLFDARIAAQAAGDAIRKLDPRELVKNPVIFVTAVVAALSTVLVLRDLAGFGHGGASVGVAGQIAAWLW
FTVLFANFAEAVAEGRGKAQAASLRKTKTETAAKKLASLDAATHQAVPAASLRTGDLVLVEAGDVIPGDGDVVAGIATVD
ESAITGESAPVIRESGGDRSAVTGGTRVVSDRIVLRITANPGESFLDRMIALVEGAKRQKTPNEIALNILLAGLSIIFLL
VVMTLPAFADYSGAAIPMAFLIALLVTLIPTTIGGLLSAIGIAGMDRLVRFSVIAKSGRAVEAAGDVDVLLLDKTGTITL
GNRQAAEFLPVGGIAERDLAEAAFLSSLADDTPEGKSIVALAQQRFGFDPAALDRAGLSFIAFTAQTRMSGVDVAATGTR
IRKGAPDTIMAMIGAMAGATVGAPAGAPAGGASAGQRGGAGGSGRDLTLAVERVAKAGGTPLVVARDGRALGVVYLKDIV
KPDIRERFLTLRSMGIKTVMVTGDNPLTAAAIAAEAGVDDFLAEATPERKLELIRSYQAEGRLVAMCGDGSNDAPALAQA
DVGVAMNTGTQAAREAGNMVDLESDPTKLIEIVMIGKQLLMSRGALTTFSIANDVAKYFAIIPALFIAAYPQLQALNVMG
LASPQSAILSAIIFNALIIVALIPLALKGVAYRPADAASLLRRNLLIYGLGGLVVPFIGIKLIDVAITTLGLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 5e-129 57
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 2e-128 56
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-128 56
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-128 56
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-128 56
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-128 56