Gene Information

Name : lolD (AZL_021210)
Accession : YP_003449303.1
Strain : Azospirillum sp. B510
Genome accession: NC_013854
Putative virulence/resistance : Virulence
Product : lipoprotein-releasing system ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2429259 - 2429999 bp
Length : 741 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGACGCCGTCATGGAACCGATGCTGGACCTGAAGGGCATCGTCCGCCGCTTCGAACAGGCGGGCTCGACGCTGGA
GGTGCTGCGCGGGGTCGACCTGACCGTCGGCGCCGGGGAACTGGTGGCGCTGGTCGGCCCGTCGGGCGCCGGCAAATCGA
CGCTGCTGCACATCGCCGGCCTGCTGGAGCGGCCGACCGACGGCGTCGTGCGCATCGCCGGTGCCGACGTGTCGAACCTG
GATGACGGCAAGCGGACCGAGGTGCGCCGCCGCTCCATCGGCTTCGTCTATCAGTTCCATCATCTGCTGCCGGAATTCTC
GGCGCGCGAGAACATCGTGCTGCCGCAGATGATCGCCGGCGTGCCCAAGTCGGTCGCCCGGCAGCGCGCCGACGAGCTTC
TGCGCATGGTCGGGCTGGAGCAGCGCGGTACCCACCGCCCGGCCCGGCTGTCCGGTGGCGAGCAGCAGCGCGTCGCCATC
GCCCGCGCGCTGGCCAACGCCCCGTCGCTGCTGATCGCCGACGAGCCGACCGGCAACCTCGACCCCCATACGGCGGAGCA
TGTCTTCGCCATGCTGTCGGCCATCGTCCGGCAGGCCAGGGTCGGCGCCCTGGTCGCGACGCATAATCTCGACCTCGCCC
GCCGCATGGACCGGGTGCTGGAGATGCGCGACGGTCATCTGGTCGAGTATCAGCCGTCGGAACTGGTTCCGCTGAGCGAG
GTGGTTCCGGAAGCGTCATAG

Protein sequence : 
MSDAVMEPMLDLKGIVRRFEQAGSTLEVLRGVDLTVGAGELVALVGPSGAGKSTLLHIAGLLERPTDGVVRIAGADVSNL
DDGKRTEVRRRSIGFVYQFHHLLPEFSARENIVLPQMIAGVPKSVARQRADELLRMVGLEQRGTHRPARLSGGEQQRVAI
ARALANAPSLLIADEPTGNLDPHTAEHVFAMLSAIVRQARVGALVATHNLDLARRMDRVLEMRDGHLVEYQPSELVPLSE
VVPEAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_003449303.1 lipoprotein-releasing system ATP-binding protein NC_008702.1.4606598. Protein 1e-36 48
lolD YP_003449303.1 lipoprotein-releasing system ATP-binding protein NC_012469.1.7686878. Protein 2e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_003449303.1 lipoprotein-releasing system ATP-binding protein VFG2059 Protein 5e-15 41