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Name : clpB (AZL_001460) Accession : YP_003447328.1 Strain : Azospirillum sp. B510 Genome accession: NC_013854 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 162012 - 164615 bp Length : 2604 bp Strand : + Note : - DNA sequence : ATGGATTTCGAGCAATACACCGAGCGCAGCCGCGGGTTCATCCAGGCCGCGCAGACCCTGGCGGTGCGCCGTGGGCATCA GCGCCTGACCCCGGAACATCTGCTGAAGACCCTGCTGGACGACAAGGAGGGCCTCGCCGCCAACCTGATCCGTACGGCGG GCGGCGATCCCCAGGCGGCCCTGTCGGCGGTCGATGCCGAACTGGACAAGCTGCCGAAGGTCGAGGGCAGCGGCGCCGGC CAGCTCTATCTGACCCCCGAACTCTCCCGCCTGTTCGAACAGGCGGAGAAGGTCGCCGAGAAGGCCGGCGACAGCTTCGT CACCGCCGAGCGCATCCTGCTGGCGCTGGCCATGGCCGACGGCACCCCGTCGGCGCGCGCGCTGAAATCCGCCGGCGTGA CGCCGCAGGCGCTCAACACCGCGATCAACGACATCCGCAAGGGCCGCACCGCCGACAGCGCCAGCGCCGAGCAGGGCTAT GACGCGCTGAAGAAATACGCCCGCGACCTGACCGCCGCGGCGCGCGACGGCAAGCTCGATCCCGTCATCGGCCGCGACGA GGAAATCCGCCGCACCATCCAGGTGCTGGCGCGGCGCACCAAGAACAATCCCGTCCTGATCGGCGAGCCCGGCGTCGGCA AGACCGCCATCGTCGAGGGGCTGGCCCAGCGCATCGTCAAGGGCGACGTGCCGGAAGGACTGAAGAACAAGCAGCTGTTG TCGCTCGACCTCGGCGCGCTGGTGGCCGGCGCCAAATATCGCGGCGAGTTCGAGGAGCGGCTCAAGGCGGTGCTGTCGGA AATCCAGGCGGCGGCCGGCGAGATCGTCGTCTTCATCGACGAGCTGCACACGCTGGTCGGCGCCGGCAAGTCGGATGGCG CCATGGACGCCTCCAACATGCTCAAACCCGCGCTGGCGCGCGGCGAGCTGCATTGCGTCGGCGCCACCACGCTGGACGAG TTCCGCAAATACATCGAGAAGGACGCGGCGCTGGCCCGGCGCTTCCAGCCGGTCTTCGTGTCGGAGCCGACGGTGGAGGA CACCATCTCGATCCTGCGCGGCCTGAAGGAGCGCTACGAGGTCCATCACGGCGTACGCATCACCGACAGCGCCATCGTGT CGGCGGCGACCCTGTCCAACCGCTACATCACCGACCGTTTCCTGCCCGACAAGGCGATCGACCTGATCGACGAGGCGGCG AGCCGCCTGCGCATGGCGGTGGACAGCAAGCCGGAGGCCATCGACGAGCTGGACCGCCGCATCATCCAGCTGAAGATCGA GCGCGAGGCGCTGAAGCGCGAGCAGGACTCGGCGTCGCGCGACCGGCTGGTCACCCTGGAGCGCGAGCTGTCCGAGCTGG AGCAGGAGTCGGCCGAGCTGACCGCCAAGTGGCAGGCCGAGAAGGACCAGCTCCAGGGCGCGCAGAAGATCAAGGAGGAT CTGGAGAAGGCGCGCACCGAACTGGAGACGGCGCAGCGCGACGGCAATTGGGGACGGGCGGGCGAGCTGGCCTATGGCGT CATTCCCGGCCTGGAGAAGGCGCTGAAGGACGCGGAGGAGCATGCCAGCAGCCGCATGCTGAACGAGGAGGTCCGGGACG GCGACATCGCCGCCGTGGTCAGCCGCTGGACCGGCGTGCCGGTGGACAAGATGCTGGCCGGCGAACGCGAGAAGCTGCTG GCGATGGAGGAGAAGCTGCGCGGCCGGGTGATCGGCCAGGACGAGGCGATCGTCGCCGTGTCCAACGCCGTGCGCCGTGC GCGGGCCGGGTTGCAGGACCCCAACCGCCCGATCGGCTCCTTCCTGTTCCTCGGTCCGACCGGCGTCGGCAAGACCGAGC TGACCAAGGCGCTGGCCGAATTCCTGTTCGACGACGAGACGGCGATGGTCCGGCTCGACATGTCCGAATATATGGAAAAA CACTCCGTCGCCCGCATGATCGGCGCGCCTCCGGGCTATGTCGGCTATGAGGAGGGCGGGGCGCTGACCGAGGCGGTGCG CCGCCGGCCCTATCAGGTCGTGCTGTTCGACGAGGTGGAGAAGGCCCATCCCGACGTCTTCAACGTGCTGCTTCAAGTGC TGGACGACGGCCGTTTGACCGACGGGCAGGGCCGCACCGTCGATTTCCGCAACGTCGTCATCATCATGACCTCCAACCTC GGCTCGCAGGCGCTGGCCGAGCAGGCGGAGGGCGAGGACAGCGCCGCCGTGCGCGACGAGGTTATGGAGGCCGTCCGCGC CCATTTCCGGCCGGAATTCCTCAACCGCCTGGACGAGATCCTGCTGTTCCACCGGCTCGACCGCCGGCATATGGGCGGCA TCGTCAAAATCCAGCTCGGCCGCCTGACCAGGATGCTCGCCGACCGCGAGATCACGCTGACGGTGGACGAGGCGGCGACC GAATGGCTGGCCGAGGCCGGTTACGACCCGGTCTATGGCGCGCGTCCGCTGAAGCGGGTGATCCAGCGCGAGTTGCAGAA CCCGCTGGCGACCCTGATCCTGGAGGGCCGGATCAAGGACGGCCAGACGGTGGCGGTCGGGGCCGAAGCCGGTTCGCTGA CCATCGACGGCCAGCCGGTCGGCGGGCTGGTCCGCAAGGGCTGA Protein sequence : MDFEQYTERSRGFIQAAQTLAVRRGHQRLTPEHLLKTLLDDKEGLAANLIRTAGGDPQAALSAVDAELDKLPKVEGSGAG QLYLTPELSRLFEQAEKVAEKAGDSFVTAERILLALAMADGTPSARALKSAGVTPQALNTAINDIRKGRTADSASAEQGY DALKKYARDLTAAARDGKLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKNKQLL SLDLGALVAGAKYRGEFEERLKAVLSEIQAAAGEIVVFIDELHTLVGAGKSDGAMDASNMLKPALARGELHCVGATTLDE FRKYIEKDAALARRFQPVFVSEPTVEDTISILRGLKERYEVHHGVRITDSAIVSAATLSNRYITDRFLPDKAIDLIDEAA SRLRMAVDSKPEAIDELDRRIIQLKIEREALKREQDSASRDRLVTLERELSELEQESAELTAKWQAEKDQLQGAQKIKED LEKARTELETAQRDGNWGRAGELAYGVIPGLEKALKDAEEHASSRMLNEEVRDGDIAAVVSRWTGVPVDKMLAGEREKLL AMEEKLRGRVIGQDEAIVAVSNAVRRARAGLQDPNRPIGSFLFLGPTGVGKTELTKALAEFLFDDETAMVRLDMSEYMEK HSVARMIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVVIIMTSNL GSQALAEQAEGEDSAAVRDEVMEAVRAHFRPEFLNRLDEILLFHRLDRRHMGGIVKIQLGRLTRMLADREITLTVDEAAT EWLAEAGYDPVYGARPLKRVIQRELQNPLATLILEGRIKDGQTVAVGAEAGSLTIDGQPVGGLVRKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-106 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-106 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003447328.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 48 |
| clpB | YP_003447328.1 | ATP-dependent Clp protease ATP-binding subunit | VFG2084 | Protein | 1e-110 | 41 |
