Gene Information

Name : fliP (AZL_012030)
Accession : YP_003448385.1
Strain : Azospirillum sp. B510
Genome accession: NC_013854
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1377587 - 1378387 bp
Length : 801 bp
Strand : -
Note : -

DNA sequence :
ATGAGCCCGACCATCGCGAACCGACTTCGGCGCCGCTGGAGGCCGCTGACCGCCGGGCTGGCGCTGGCGCTCGGCATCGG
TCTGGCGCTGGGCCTGATTTCGGGGTTGAGCGCCGGGCCGGCGCTGGCGCAGAGCCTGACCTTCGACCTGGGCGATGCCG
GCGGCACCGCCACCGGCCGCATCGTCCAGACCATCGGCCTGATCACGGTGCTGTCTCTGGCGCCGTCGATCCTGATCATG
ATGACCGCCTTCACCCGCATCGTCATCGTGCTGTCCTTCCTGCGCAACGCGCTGGGCGTGCAGCAGGTGCCGCCGACCAC
GGTCATGATGTCGCTGGCGCTGTTCCTGACCTTCTTCGTGATGGCCCCGGTGTTCGAGCGCAGCTACACCCAGGGCATCC
AGCCGCTGATGAACCAGGAGATCGACGAGATGGAGGCGTTCCGCCGCACGGTGGCGCCGCTACGCGATTTCATGCTGCAC
CACACCGCCGAGAAGGATCTGCGCCTGTTCATGGACATGGCCCGTCTCCAGAACGTGCAGGAACCGAACGACATGCCGCT
TCATGTCCTGGTTCCGGCCTTCATGATCTCCGAGATCAAGCGCGGATTCGAAATCGGCTTCCTGCTGTTCCTCCCCTTCC
TGATCATCGACATGGTGGTGTCGTCCATCCTGATGTCGATGGGCATGATGATGCTGCCGCCGACCATGGTCGCCATCCCG
TTCAAAATCATCTTCTTCGTGCTGGTCGACGGGTGGTACCTGATCGCCGGCTCGCTGGCGCGCAGTTTCGGGACGCTCTG
A

Protein sequence :
MSPTIANRLRRRWRPLTAGLALALGIGLALGLISGLSAGPALAQSLTFDLGDAGGTATGRIVQTIGLITVLSLAPSILIM
MTAFTRIVIVLSFLRNALGVQQVPPTTVMMSLALFLTFFVMAPVFERSYTQGIQPLMNQEIDEMEAFRRTVAPLRDFMLH
HTAEKDLRLFMDMARLQNVQEPNDMPLHVLVPAFMISEIKRGFEIGFLLFLPFLIIDMVVSSILMSMGMMMLPPTMVAIP
FKIIFFVLVDGWYLIAGSLARSFGTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 3e-15 42
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 5e-15 41
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 4e-15 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 4e-15 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 4e-15 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 3e-15 41
lscR AAO18040.1 LscR Virulence TTSS locus Protein 1e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_003448385.1 flagellar biosynthetic protein VFG2494 Protein 9e-38 54
fliP YP_003448385.1 flagellar biosynthetic protein VFG2338 Protein 3e-36 53
fliP YP_003448385.1 flagellar biosynthetic protein VFG1259 Protein 2e-35 53
fliP YP_003448385.1 flagellar biosynthetic protein VFG2016 Protein 3e-31 50
fliP YP_003448385.1 flagellar biosynthetic protein VFG0394 Protein 9e-17 42
fliP YP_003448385.1 flagellar biosynthetic protein VFG0044 Protein 5e-16 42