Gene Information

Name : salX (smi_0840)
Accession : YP_003445956.1
Strain : Streptococcus mitis B6
Genome accession: NC_013853
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 793549 - 794250 bp
Length : 702 bp
Strand : +
Note : COG1136, ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAAGCAACTAATTAGTCTAAAAAATATCTGCAGAAGTTACCGTAACGGTGACCAAGAACTGCAGGTACTCAAAAATAT
TAACCTTGAAGTGAATGAGGGTGAATTCGTTGCTATCATGGGACCATCAGGTTCTGGTAAGTCTACGCTGATGAATACGA
TTGGCATGTTGGATACACCAACCAGTGGTGAGTATTATCTTGAAGGCCGAGAAGTAGCTGGACTTGGTGAAAAACAACTA
GCCAAGGTCCGTAACCAACAAATTGGTTTTGTCTTTCAGCAGTTCTTTCTTCTATCCAAACTTAATGCTCTGCAAAATGT
AGAATTGCCCTTGATTTACGCAGGAGTTTCGGCTTCAAAACGTCGCAAGTTAGCTGAGGAATATCTAGATAAGGTTGAAT
TGACTGAGCGTAGTCACCATTTACCTTCGGAATTATCTGGTGGTCAAAAGCAACGTGTGGCTATTGCGCGTGCCTTGGTA
AACAATCCTTCTATTATCTTAGCAGACGAACCAACAGGAGCCTTGGATACCAAAACAGGTAACCAAATTATGCAACTATT
GGTTGAACTAAATAAAGAAGGAAAAACCATTATCATGGTAACGCATGAGCCTGAGATCGCTGCTTATGCCAAACGCCAGA
TTGTCATTCGAGATGGAGTTATTTCATCTGATAGTGCGCAGTTAGAAAAGGAGGAAAACTAA

Protein sequence : 
MKQLISLKNICRSYRNGDQELQVLKNINLEVNEGEFVAIMGPSGSGKSTLMNTIGMLDTPTSGEYYLEGREVAGLGEKQL
AKVRNQQIGFVFQQFFLLSKLNALQNVELPLIYAGVSASKRRKLAEEYLDKVELTERSHHLPSELSGGQKQRVAIARALV
NNPSIILADEPTGALDTKTGNQIMQLLVELNKEGKTIIMVTHEPEIAAYAKRQIVIRDGVISSDSAQLEKEEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 42
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 1e-32 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-38 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-38 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-38 41
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 9e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
salX YP_003445956.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-104 98
salX YP_003445956.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-48 48
salX YP_003445956.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-44 46
salX YP_003445956.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
salX YP_003445956.1 ABC transporter ATP-binding protein VFG0869 Protein 1e-26 41