Gene Information

Name : psaA (smi_0634)
Accession : YP_003445751.1
Strain : Streptococcus mitis B6
Genome accession: NC_013853
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate-binding lipoprotein (Pneumococcal surface adhesin A
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 581947 - 582876 bp
Length : 930 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAATTAGGTACATTGTTCGTTCTCTTTCTTTCCGTCATTGCTCTTGTAGCATGTGCTAGTGGAAAAAAAGATGC
AGCTTCTGGTCATAAACTAAAAGTTGTGGCTACAAACTCAATCATCGCTGATATTACTAAAAATATTGCTGGTGACAAGA
TTGATCTTCACAGTATCGTTCCTGTTGGCCAAGACCCACACGAATACGAACCACTCCCTGAAGACGTTAAGAAAACTTCT
GAAGCAGACCTCATTTTCTATAACGGTATCAACCTTGAAACAGGTGGCAATGCTTGGTTTAGCAAATTGGTAGAAAATGC
CAAGAAAACTGAAAACAAAGACTACTTTGCAGTCAGCGAAGGTGTTGAAGTCATCTACCTTGAAGGAAAAAATGAAAAAG
GTAAAGAAGACCCACACGCTTGGCTTAACCTTGAGAATGGAATTATCTTTGCTAAAAATATCGCCAAACAATTGAGCGCT
AAAGATCCTAACAACAAGGAATTCTATGAAAAAAATCTCAAAGAATATACTGATAAGTTAGACAAACTTGATAAAGAAAG
TAAGGATAAATTTAATAACATCCCTGCTGAAAAGAAACTCATTGTAACCAGCGAAGGAGCATTCAAATACTTCTCTAAAG
CCTATGGTGTCCCAAGTGCCTACATCTGGGAAATCAATACTGAAGAAGAAGGAACACCTGAACAAATCAAGACCTTGGTT
GAAAAACTTCGCCAAACAAAAGTTCCATCACTCTTTGTAGAATCAAGTGTAGATGACCGTCCAATGAAGACTGTTTCACA
AGACACAAACATCCCAATCTACGCACAAATCTTTACTGACTCTATCGCAGAACAAGGTAAAGAAGGCGACAGCTACTACA
ACATGATGAAATACAACCTTGACAAGATTGCTGAAGGATTGGCAAAATAA

Protein sequence :
MKKLGTLFVLFLSVIALVACASGKKDAASGHKLKVVATNSIIADITKNIAGDKIDLHSIVPVGQDPHEYEPLPEDVKKTS
EADLIFYNGINLETGGNAWFSKLVENAKKTENKDYFAVSEGVEVIYLEGKNEKGKEDPHAWLNLENGIIFAKNIAKQLSA
KDPNNKEFYEKNLKEYTDKLDKLDKESKDKFNNIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLV
EKLRQTKVPSLFVESSVDDRPMKTVSQDTNIPIYAQIFTDSIAEQGKEGDSYYNMMKYNLDKIAEGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 2e-103 77
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 1e-103 77

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
psaA YP_003445751.1 manganese ABC transporter substrate-binding lipoprotein (Pneumococcal surface adhesin A VFG1359 Protein 5e-129 96
psaA YP_003445751.1 manganese ABC transporter substrate-binding lipoprotein (Pneumococcal surface adhesin A VFG2165 Protein 5e-82 58
psaA YP_003445751.1 manganese ABC transporter substrate-binding lipoprotein (Pneumococcal surface adhesin A VFG2157 Protein 2e-76 54