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Name : tnpB (smi_0479) Accession : YP_003445619.1 Strain : Streptococcus mitis B6 Genome accession: NC_013853 Putative virulence/resistance : Unknown Product : transposase, ISSmi2 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3666 EC number : - Position : 440329 - 442014 bp Length : 1686 bp Strand : - Note : COG3666 DNA sequence : ATGTATAAAGATTATAACACAAATCAGTTAAGTTTGGAAGTAAATCTTGCCTACGATATTCCATCAAATCACGAAGCAAG AATGATTAGCCTCTTTGTAGACAGTATCCCTAGTCAAGTTCTATTGGAAGAGACCTCTCACACTGGTCGCCCTGCCTTTC ATCCAGCCATGCTCATGAAGATGACCCTGTTCGCTTACGCTCGTCAAGTGTTCTCTGGACGTAAAATCGTTCAAATGAAC TCAGAAGTCATTCCCATGAAATGGTTGAGCCAAGATACCTATGTTAGCTATAAAACGATTAATAACTTCCGCTCCAGTAA ACATGCCAACAACCTAATCAAAACTGCTTTTATTTACTTCACTTTACTCATGCGTGAGAATGGGATGATTGAGGATGATG CCTTGTTCATTGATGGAACAAAACTAGAAGCTGATGCCAACCTCTATTCTTTCACTTGGAAAAGAGCTATTGACAAATAT GAAGCAGCCTTGAATGGGAAAATTTCCCAGCTCTATGACCAGCTGATTCAAGAAGGAGTAAATCTCGCCTTATCTAAAGA AGAACGGGAAACCAGTCAGGGTTTGGAGGAGCTACTAGAAAAAACGGAGGCTACCTTAGTTGAAATAGAACAAGCTATTG AAGAAGAGCCTAAAGTGATAAAGGGTGGGTCTGCCAATAGACAAAAACGCCGTCGGATAAAGAAAATCCGTAAGCAATTA AAGGATGATTTCCTTCCTCGTAAACAGCGATATGAAGAAGCTAGAAAAATTTTAGAAGACCGCAACTCTTTCTCAAAAAC GGATCATGATGCCACCTTTATGCGAATGAAGGAAGACCATATGCAAAATGGGCAACTGAAACCTGGTTATAATGTCCAAG CGGCTACCAATGGTCAGTATGTCCTTGATTTTGATATCTTTCCAAATCCAACAGACACTCGCACTCTGAAACCTTTCCTC CAATCGATTCAAACCCTAGACTTATTCAACTATATCGTAGCAGATGCTGGTTATGGTAGCGAAGAAAATTATCGTTTTAT CATTGATGAATTGGAAAAAATACCGCTTATTCCCTACACCATGTATCAGAAGGAATTGACTAAAAAGTACCAGACGAGCA CAGATAATCCAATGAACTGGGAATATCTTGAGGACACGGACCAGTTTATAAAGCCCGACGGCGTAGTTTATTCTTTTAAG AACTACTCTAGTCGAACTGACAAGTATGGCTTTCAACGTGATTTCAAGATTTATGAGGCTGATAAAGTTCAAGACACTCC AGAGTTAGAACAGTTGGCTAAAACAGATAGTGGAAACCAGAAACAAATCCATTATAATCCAACTTGGAATTACTTTAAGG AACTCCTTAAGCAAACATTACATAGTGAAGAAGGCTCTCGAATCTATGCCAAACGGAAAATCGATGTTGAACCCGTTTTT GGTAGATTGAAGAGTGTTTTTGGCGTGCGCAGAGTGCATGTCAGAGGGAAACAAGCTGTCTCAACAGAAATAGGATTCAT CTTTATGAGCATGAATCTCACCAAGTTGGCCAAGAATCTAGCCTCTAAAACATCCACTATTCAAAAACCACACAGTATTT CTTTCAGCTTGATTGGATTCAAGACTGGAATCACTGTGTGGTTTTATTTAGAAGCTAGTTTTTGCCCAGCCTCTTTATTT TTTTGA Protein sequence : MYKDYNTNQLSLEVNLAYDIPSNHEARMISLFVDSIPSQVLLEETSHTGRPAFHPAMLMKMTLFAYARQVFSGRKIVQMN SEVIPMKWLSQDTYVSYKTINNFRSSKHANNLIKTAFIYFTLLMRENGMIEDDALFIDGTKLEADANLYSFTWKRAIDKY EAALNGKISQLYDQLIQEGVNLALSKEERETSQGLEELLEKTEATLVEIEQAIEEEPKVIKGGSANRQKRRRIKKIRKQL KDDFLPRKQRYEEARKILEDRNSFSKTDHDATFMRMKEDHMQNGQLKPGYNVQAATNGQYVLDFDIFPNPTDTRTLKPFL QSIQTLDLFNYIVADAGYGSEENYRFIIDELEKIPLIPYTMYQKELTKKYQTSTDNPMNWEYLEDTDQFIKPDGVVYSFK NYSSRTDKYGFQRDFKIYEADKVQDTPELEQLAKTDSGNQKQIHYNPTWNYFKELLKQTLHSEEGSRIYAKRKIDVEPVF GRLKSVFGVRRVHVRGKQAVSTEIGFIFMSMNLTKLAKNLASKTSTIQKPHSISFSLIGFKTGITVWFYLEASFCPASLF F |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 5e-83 | 45 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 3e-91 | 45 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 4e-91 | 45 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 4e-91 | 45 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 4e-91 | 45 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 9e-90 | 45 |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | Protein | 2e-92 | 42 |
