|
Name : smi_0269 (smi_0269) Accession : YP_003445409.1 Strain : Streptococcus mitis B6 Genome accession: NC_013853 Putative virulence/resistance : Unknown Product : transposase, ISSmi5 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3464 EC number : - Position : 263358 - 264674 bp Length : 1317 bp Strand : + Note : pfam01610 DNA sequence : ATGAACAATATACTAGAAGCTACGCTACAAATCAAAGATAAAAACATGATTTGGGATAATAACGTTCAAGAGAAGATATT TAAAAAGAGAAAATCTCTATTTTATTCAGCTACATATACGCATAAACCAGAATTTTGTACTGTCTGTGGATGTGTTAGCC AAAATAATAATATCGTAAAAAACGGCACGAAAACTTCTCGTATCACTCTCTGTTCTGTTTCAGGCCTACCGGCCTACTTA AATCTACGCAAGCAGAGATTTCTCTGTAGAGAATGCGGCTCTTCATTCACCGCAGACACTAGTCGAATCGTAGAAAAACA CTGTCATATCTCTAAACGATTAAAAAACGAAATCAAATCAAAAATAAGTGAAACAGTATCTGAAACATATATCGCAAAAG AAACTAATGTATCAGTTCATACTGTAAGACGTATCATAGATGATACAGCACGATTATTAACGATTAAACCATTACATGAT TTACCTGAGCATTTGTGTTTTGATGAATTTAAATCTGTTAAATCTTCCGATTGCAATATGAGCTTCATTATTTTTGATAG CACTACACACAAGTTGGTCGATGTTGTACGAGATAGAAAATCTTACAGTTTGAAACAATATTTTTATCGTTTTGAGCCTA AGACTAGATTAAAGGTGAAAACTATCTCCATCGATATGTACTTGCCATACATTCAATTAATAAAAGAAATGTTTCCTAAC GCAAAAATTATCATTGATCCTTTTCACATTGTACAAGCCTTGAATAGAGAATTAAATAGAACTCGGGTACGTATCATGAA TCAGCATCGTTATAAAAATCCTAAATTATATCGAAAGTTAAAATACTATTGGAAGTTAATTTTAAAGAACTCTAATGAAC TTCAGAACTATAAATATAATCGTTATAAGCTTTTTGAAAGCTTCATAACAAGTAAAGGAATCGTAGATTATATCTTAGAA AAAAATCCATCTCTTAAAAATGATTATGAGGTTGTATATTCACTTCGTGAATGTATACAGGATAGAGATTATATAGAATT CAAGGAAACGATTGAAGCAGCTACGCAATTAGACCTATCTCCTGGTTTAAAAAGAGTTTTAAAGACTCTTATGACTTACT TGCCATATATTCAAAATACTTGTGAGTATCCAACTAGAACAAATGGCCCTATTGAAGGAATAAACAATAAAATAAAAGCG CTTAAAAGAAATGCCTACGGCTTTAGAAACTATTACCATTTTAGAAATAGGATTATTTTAATAACAAAAATGTTTGGCCC AAAACAAAAAGGAATTAAGCAACAATTAGTTGTTTAA Protein sequence : MNNILEATLQIKDKNMIWDNNVQEKIFKKRKSLFYSATYTHKPEFCTVCGCVSQNNNIVKNGTKTSRITLCSVSGLPAYL NLRKQRFLCRECGSSFTADTSRIVEKHCHISKRLKNEIKSKISETVSETYIAKETNVSVHTVRRIIDDTARLLTIKPLHD LPEHLCFDEFKSVKSSDCNMSFIIFDSTTHKLVDVVRDRKSYSLKQYFYRFEPKTRLKVKTISIDMYLPYIQLIKEMFPN AKIIIDPFHIVQALNRELNRTRVRIMNQHRYKNPKLYRKLKYYWKLILKNSNELQNYKYNRYKLFESFITSKGIVDYILE KNPSLKNDYEVVYSLRECIQDRDYIEFKETIEAATQLDLSPGLKRVLKTLMTYLPYIQNTCEYPTRTNGPIEGINNKIKA LKRNAYGFRNYYHFRNRIILITKMFGPKQKGIKQQLVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | YP_251995.1 | transposase for ISSha1 | Not tested | SCCmec | Protein | 3e-76 | 48 |
| tnp | YP_251945.1 | transposase for ISSha1 | Not tested | SCCmec | Protein | 6e-76 | 48 |
| SACOL1879 | YP_186706.1 | IS1181 transposase | Not tested | vSa¥â | Protein | 2e-63 | 41 |
| tnp | NP_371686.1 | IS1181 transposase | Not tested | vSa¥ã | Protein | 1e-63 | 41 |
| SA1006 | NP_374278.1 | IS1181 transposase | Not tested | vSa¥ã | Protein | 1e-63 | 41 |
