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Name : clpC (smi_2045) Accession : YP_003447141.1 Strain : Streptococcus mitis B6 Genome accession: NC_013853 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2101481 - 2103913 bp Length : 2433 bp Strand : - Note : COG0542, ClpA, ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGAACTATTCAAAAGCATTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGCCATTTTGGAGCTCGTTACCTAGA GTCTTGGCACTTGTTGATTGCCATGTCCAATCACAGTTATAGTGTGGCAGGGGCAACTTTAAATGATTATCCATATGAGA TGGACCGTTTAGAAGAGGTCGCTTTGGAACTGACTGAAACGAACTATAGCCAGGATGAAACCTTTACGGAATTGCCGTTT TCTCATCGTTTGCAGGTTCTTTTTGACGAAGCAGAGTATGTAGCGTCAGTGGTCCATGCTAAGATGCTAGGGACGGAGCA CGTCCTTTATGCGATTTTGCATGATGGAAATGCCTTGGCGACTCGTATTTTGGAGAGGGCTGGTTTTTCTTATGAAGACA AGAAAGATCAGGTCAAGATTGCTGCTCTTCGTCGAAATTTAGAAGAACGGGCAGGCTGGACCCGTGAAGACCTCAAGGCT TTACGCCAACGCCATCGTACAGTAGCTGATAAGCAAAATTCTATGGCTAATATGATGGGCATGCCCCAGACTCCGAGTGG TGGTCTCGAGGACTATACGCATGATTTGACAGAGCAAGCGCGTTCTGGCAAGTTAGAACCAGTCATTGGTCGAGATAAGG AAATCTCGCGTATGATTCAAATCTTGAGCCGTAAGACCAAGAATAATCCTGTCTTGGTTGGAGATGCTGGTGTTGGGAAA ACTGCTCTGGCGCTTGGTCTTGCCCAGCGTATTGCTAGTGGGGATGTGCCTGCGGAAATGGCTAAGATGCGCGTGTTGGA GCTGGATTTGATGAATGTCGTTGCAGGGACACGTTTTCGTGGTGACTTTGAAGAACGCATGAACAATATCATCAAGGATA TTGAGGAAGATGGGCAAGTCATCCTCTTTATCGATGAACTTCATACCATCATGGGTTCTGGGAGCGGGATTGACTCAACT CTGGATGCGGCCAATATCTTGAAACCAGCCTTGGCGCGTGGTACCTTGAGAACGGTTGGCGCGACCACTCAGGAGGAATA CCAAAAACATATCGAAAAAGATGCGGCCCTTTCTCGTCGTTTCGCCAAAGTAACGATTGAAGAGCCAAGCGTGGCCGACA GTATGGCGATTTTGCAAGGTTTGAAGGTGACTTATGAGAAACACCACCGTGTGCAAATCACAGATGAAGCGGTTGAAACA GCCGTTAAGATGGCCCATCGTTACTTGACTAGTCGCCATTTGCCAGACTCTGCTATCGATCTCTTGGATGAGGCAGCAGC AACAGTGCAAAATAAGGCTAAGCATGTAAAAGCAGACGATTCAGGTTTGAGTCCAGCTGACAAGGCCTTGATGGATGGTA AGTGGAAACAAGCTACTCAACTAATTGCTAAAGAAGAGGAAGTGCCTGTCTATAAAGACTTGGTGACGGAGTCTGATATT TTGACCACCTTGAGTCGCTTGTCAGGCATTCCAGTCCAAAAACTGACTCAGACTGATGCGAAGAAATACCTGAATCTGGA AGCTGAATTGCACAAACGTGTCATCGGTCAAGATCAAGCTGTTTCAAGCATTAGCCGTGCGATTCGCCGCAACCAGTCAG GGATTCGCAGTCACAAGCGTCCGATTGGTTCCTTTATGTTCCTAGGACCTACAGGTGTCGGTAAGACCGAATTGGCCAAG GCTCTGGCGGAAGTTCTCTTTGATGACGAATCAGCTCTTATCCGCTTTGATATGAGTGAGTATATGGAGAAATTTGCAGC CAGCCGTCTCAATGGAGCTCCTCCGGGCTATGTGGGCTACGAAGAAGGTGGGGAGTTGACCGAGAAAGTTCGCAACAAAC CATACTCTGTTCTCCTCTTTGACGAGGTAGAGAAGGCCCATCCAGATATCTTTAATGTTCTCTTGCAGGTCTTGGATGAT GGTGTCTTGACCGATAGCAAGGGCCGCAAGGTTGACTTTTCAAATACCATTATTATCATGACGTCAAATCTTGGTGCGAC AGCTCTTCGTGATGACAAGACAGTTGGTTTTGGGGCTAAGGACATTCGTTTTGACCAGGAAAATATGGAAAAACGCATGT TTGAAGAGCTGAAAAAAGCTTATAGACCTGAGTTTATTAACCGTATTGATGAGAAGGTGGTCTTCCATAGCCTTTCTAGC GACCATATGCAGGAAGTAGTGAAGATTATGGTCAGACCTTTAGTGGCAAGTTTGGCTGAAAAAGGTATTGACTTGAAATT ACAAGCTTCCGCACTGAAATTGTTGGCCAATCAAGGATATGACCCAGAGATGGGAGCTCGTCCACTTCGCAGAACCCTGC AAACAGAAGTGGAAGACAAGTTAGCAGAACTTCTTCTCAAGGGAGATTTAGTGGCAGGCAACACACTTAAGATTGGTATC AAAGCAGGCCAGTTAAAATTTGATATTGTATAA Protein sequence : MNYSKALNECIESAYMVAGHFGARYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETNYSQDETFTELPF SHRLQVLFDEAEYVASVVHAKMLGTEHVLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKA LRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK TALALGLAQRIASGDVPAEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQVILFIDELHTIMGSGSGIDST LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMAILQGLKVTYEKHHRVQITDEAVET AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKAKHVKADDSGLSPADKALMDGKWKQATQLIAKEEEVPVYKDLVTESDI LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS DHMQEVVKIMVRPLVASLAEKGIDLKLQASALKLLANQGYDPEMGARPLRRTLQTEVEDKLAELLLKGDLVAGNTLKIGI KAGQLKFDIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-140 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_003447141.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0079 | Protein | 4e-161 | 47 |
| clpC | YP_003447141.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0080 | Protein | 5e-125 | 43 |
