Gene Information

Name : smi_1970 (smi_1970)
Accession : YP_003447066.1
Strain : Streptococcus mitis B6
Genome accession: NC_013853
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2022957 - 2023598 bp
Length : 642 bp
Strand : -
Note : COG1136, antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGATTGAGTTGAAAAATATTACGAAAACCATTGGGGGAAAAGTGATTTTGGATAACTTATCTCTCAGGATTGATCAGGG
GGATTTGGTAGCCATTGTTGGCAAGAGTGGTAGTGGTAAGTCGACCTTGTTAAATTTATTAGGTTTGATAGATGGTGATT
ATAGCGGACGGTATGAGATTTTTGGTCAGACAAATCTAGCGGTCAATTCTGCTAAGTCGCAAACAATAATCCGTGAACAT
ATCTCTTATCTGTTTCAAAATTTTGCCCTGATTGATGATGAAACGGTCGAGTACAATCTTATGCTGGCACTGAAATATGT
GAAATTGTCCAAGAAAGACAAGCTCAAAAAGGTGGAAGAAATTTTAGAGAGAGTAGGTTTGTCAGCTACTTTGCATCAAA
AGGTCTCCGAGTTGTCTGGGGGCGAACAACAACGAATTGCAGTTGCTAGAGCCATCTTAAAACCCAGCCAGCTGATTTTA
GCCGATGAACCTACAGGTTCGCTGGATTCTGAAAATAGAGATTTGGTCTTGAAGTTTCTCTTAGAGATGAATCGAGAAGG
GAAAACAGTCATTATCGTGACCCACGATGCTTATGTAGCCCAACAATGTCATCGTATCATTGAATTGGGCGAGGGGGAAT
GA

Protein sequence : 
MIELKNITKTIGGKVILDNLSLRIDQGDLVAIVGKSGSGKSTLLNLLGLIDGDYSGRYEIFGQTNLAVNSAKSQTIIREH
ISYLFQNFALIDDETVEYNLMLALKYVKLSKKDKLKKVEEILERVGLSATLHQKVSELSGGEQQRIAVARAILKPSQLIL
ADEPTGSLDSENRDLVLKFLLEMNREGKTVIIVTHDAYVAQQCHRIIELGEGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-51 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
smi_1970 YP_003447066.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 3e-85 99
smi_1970 YP_003447066.1 ABC transporter ATP-binding protein CP003583.1.gene613.p Protein 5e-31 45