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Name : lysS (smi_1296) Accession : YP_003446404.1 Strain : Streptococcus mitis B6 Genome accession: NC_013853 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1288736 - 1290226 bp Length : 1491 bp Strand : + Note : - DNA sequence : ATGTCAACAGAACATATGGAAGAACTAAATGATCAGCAAATCGTTCGCCGTGAAAAAATGGCTGCGCTTCGTGAACAAGG AATCGATCCTTTCGGAAAACGCTTTGAACGCACTGCAAATTCACAAGAATTAAAAAATAAATATGCCGACTTCGATAAAG AACAATTACACGATAAAAACGAAACAGCTACTATCGCAGGACGCTTGGTAACCAAACGTGGTAAAGGTAAAGTAGGTTTT GCCCACCTTCAAGACCGTGAAGGTCAAATCCAAATCTACGTTCGTAAGGATGCTGTCGGTGAAGAAAACTATGAAATCTT CAAAAAAGCAGACCTTGGTGACTTCCTTGGTGTAGAAGGCGAAGTGATGCGTACTGATATGGGAGAACTCTCTATCAAGG CTACTCACATTACTCACTTGTCTAAAGCACTTCGCCCACTTCCTGAGAAATTCCACGGTTTGACAGACGTTGAAACAATT TACCGTAAACGTTACCTTGACTTGATTTCTAACCGTGAAAGCTTTGAGCGTTTTGTCACTCGTTCAAAAATCATTTCTGA AATCCGTCGTTACCTTGACCAAAAAGGTTTCCTTGAAGTAGAAACACCTGTTCTTCACAACGAAGCTGGTGGTGCTGCTG CCCGTCCATTTATCACTCACCACAATGCCCAAAACATTGACATGGTGCTTCGTATCGCGACTGAGCTTCACTTAAAACGC CTTATCGTGGGTGGTATGGAGCGTGTCTATGAAATCGGCCGTATCTTCCGTAACGAAGGAATGGATGCGACTCATAACCC TGAGTTCACTTCTATCGAAGTCTACCAAGCTTATGCAGACTTCCAAGACATCATGGATTTGACGGAAGGCATTATCCAAC ACGCTGCTAAATCAGTTAAAGGCGACGGCCCAGTCAACTATCAAGGAACTGAAATCAAGATTAACGAACCATTTAAACGT GTTCACATGGTGGAGGCTATCAAAGAAATTACTGGTGTCGATTTCTGGCAAGACATGACTTTCGAGGAAGCCAAAGCTAT CGCTGCTGAGAAGAAAGTTCCAGTTGAGAAACACTACACTGAAGTTGGCCACATTATCAATGCCTTCTTTGAAGAGTTTG TTGAAGAAACCTTGATCCAACCAACCTTTGTCTATGGGCATCCAGTAGCTGTATCTCCACTTGCTAAGAAGAATCCTGAA GACCAACGCTTTACTGACCGTTTCGAGCTCTTCATCATGACTAAGGAGTACGGTAATGCCTTTACTGAGCTCAATGACCC AATCGACCAACTTAGCCGTTTTGAAGCCCAAGCTAAAGCTAAAGAACTTGGTGATGATGAAGCGACAGGTATCGACTACG ACTACATTGAAGCCCTTGAATATGGTATGCCACCTACAGGTGGTTTGGGAATCGGTATCGACCGTCTCTGCATGCTCCTT ACTGATACAACCACTATCCGTGATGTATTACTCTTCCCAACAATGAAATAA Protein sequence : MSTEHMEELNDQQIVRREKMAALREQGIDPFGKRFERTANSQELKNKYADFDKEQLHDKNETATIAGRLVTKRGKGKVGF AHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGVEGEVMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETI YRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKR LIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKR VHMVEAIKEITGVDFWQDMTFEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPE DQRFTDRFELFIMTKEYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLL TDTTTIRDVLLFPTMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 7e-106 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003446404.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 4e-106 | 47 |
