Gene Information

Name : Alvin_3208 (Alvin_3208)
Accession : YP_003445136.1
Strain :
Genome accession: NC_013852
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 70095 - 70559 bp
Length : 465 bp
Strand : +
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: pag:PLES_06951 single-stranded DNA-binding protein

DNA sequence :
ATGAGTCGTGGAATCAACAAAGTCATCCTGATCGGCAATCTTGGAGCCGACCCCGAAGTTCGATACCTGCCCAGCGGCGA
CCCCGTGGCCAATCTGCGCTTGGCCACCAGCGAGAGCTGGAAGGATCGCAATACCGGAGAGACCCAGGAACGCACGGAGT
GGCATAGCGTGGTCATCTTCGGCAAGCTCGCCGAGATCGCCAGAACCTATCTGCACAAGGGCAGCCGGATCTATGTCGAG
GGCAAGCTGCGCACCCGCAAATGGCAGACTCAGGACGGCCAGGACCGCTACACCACCGAAGTCGTGATTGACATTAACGG
CACCATGCAGATGCTCGATGGACGCCCGGACAGCGGCGAAGAGTACCAACGCCCCGCCGAATCCGCGAACCGCCGCCAGG
CCACGACTTCGCCCGCCGCCAAACGCGAACCTGAACCGGCGCTGGAAGACGACATCCCGTTCTGA

Protein sequence :
MSRGINKVILIGNLGADPEVRYLPSGDPVANLRLATSESWKDRNTGETQERTEWHSVVIFGKLAEIARTYLHKGSRIYVE
GKLRTRKWQTQDGQDRYTTEVVIDINGTMQMLDGRPDSGEEYQRPAESANRRQATTSPAAKREPEPALEDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 3e-39 54
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 3e-39 54
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 2e-39 54
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 5e-33 51
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 1e-29 46