Gene Information

Name : Alvin_0640 (Alvin_0640)
Accession : YP_003442622.1
Strain : Allochromatium vinosum DSM 180
Genome accession: NC_013851
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 750588 - 751214 bp
Length : 627 bp
Strand : +
Note : PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: azo:azo1376 transcriptional regulatory protein

DNA sequence : 
ATGACTGCCGAAGCCAACGCCATTGTATTCATCGTCGACGACGACCAGGCCATGCGCACCTCGCTGCAATGGCTGATCGA
GTCGACCGGGATGTCGGTCAAGACCTATGACTCGGCCGATGCCTTCCTGGCCGACTATTATCCCGGCCGTGCCGGCTGCC
TGCTGCTGGACGTGCGCATGCCGGGCATGAGCGGTCTGGAGCTGCAAGCCTATCTGGCGCGCGAGGGGTTCCGGATCCCG
GTCATCCTCATCACCGGGCATGGCGACGTGGCCATGGCGGTGCGCGCCATGAAAGCCGGAGCCATGGACTTCATCGAAAA
GCCCTTCCATGACGAGGATCTGTTGCGCAGCCTCCGCAACGCGCTCGACCATGATCAGAAGACGCGGGCCAATCGTCTGG
CGCGTGCCGACATCGCCATGCGTCTGGCCGAGCTGACGCCGCGCGAGCACGAGGTCATGGCCATGGTCACGGACGGCAAG
TCGAACAAGGAGATCGCCGCCGCGCTCGGGGTGAGCGCCAAGACGGTCGAGGCGCATCGCGCGCGGGTGATGGAGAAGAT
GCGCGCCGAGTCGCTGGCCGAGCTGGTGCGCATGGCGCTGATCGCCGCGCCTGAGGCGTTGGTCTGA

Protein sequence : 
MTAEANAIVFIVDDDQAMRTSLQWLIESTGMSVKTYDSADAFLADYYPGRAGCLLLDVRMPGMSGLELQAYLAREGFRIP
VILITGHGDVAMAVRAMKAGAMDFIEKPFHDEDLLRSLRNALDHDQKTRANRLARADIAMRLAELTPREHEVMAMVTDGK
SNKEIAAALGVSAKTVEAHRARVMEKMRAESLAELVRMALIAAPEALV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 4e-28 42
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 4e-28 42
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 4e-28 42
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 4e-28 42
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 3e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alvin_0640 YP_003442622.1 two component LuxR family transcriptional regulator VFG0488 Protein 1e-28 42