|
Name : Alvin_0058 (Alvin_0058) Accession : YP_003442062.1 Strain : Allochromatium vinosum DSM 180 Genome accession: NC_013851 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 63723 - 65615 bp Length : 1893 bp Strand : - Note : TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: tgr:Tgr7_0487 thiamine biosynthesis protein ThiC DNA sequence : ATGAGCGCCATCCCGCACGACTTCGTCCGCAAGACCGCCCAGCTCTCCGAGGAGGTGACACGGCCGTTTCCGAACTCGCG CAAGGTCCATGTGACCGGCTCGCGTCCCGACATCCGGGTGCCGATGCGCGAAGTGACGCTGACGCCGACTCAGACCAATC AGGAACCGGAGGAGAATCCCCCAATCCTGATCTATGACACCTCCGGTCCCTATACCGATCCGGAAGCGCGCATCGATCTG CTCGCCGGTCTGCCGGACATCCGTTCGGGCTGGATCGCCGAGCGCGAGGACACCGAACAGCTCGACGGCCCGACCTCGGC TTTCGGGCGCGGGCGACAGAACGATCCTCAGCTCGCCCATCTGCGCTTCGAGCATCTGCGCACCCCGCGCCGCGCCAAGT CCGGGCGCAACGTCACCCAGATGCACTATGCGCGTCAGGGGATCATCACGCCCGAAATGGAATACGTCGCCATCCGCGAG AACATGCGCCTGGACGAACTGCGCGCCGATCCACGTTACGCCAAGCTGCTGCGCCAGCATCCGGGGCAGTCCTTCGGCGC CGCCATCCCCGAGACTATCACGCCCGAGTTCGTGCGCGACGAGATCGCCTGCGGGCGCGCCATCATCCCGGCCAACATCA ATCACCCCGAGCTGGAGCCGATGATCATCGGGCGCAACTTCCGGGTGAAGATCAACACCAACATCGGCAACTCGGCCCTG ACCTCGTCGATCGAGGAGGAGGTCGAGAAGATGGTGTGGTCGGCGCGCTGGGGCGGCGATACGCTCATGGACCTCTCGAC CGGCAAGCACATCCATGAGACGCGCGAATGGATCCTGCGCAACGCGCCCATGCCGATCGGCACCGTGCCCATCTATCAGG CGCTGGAGAAGGTCGACGGCAAGCCCGAGGAACTGAGCTGGGAGATCGTGCGCGATACGCTCATCGAGCAGGCCGAGCAG GGAGTGGACTATTTCACCATCCATGCCGGCGTCCTGCTGCGTTATGTGCCGCTGACCGCCGACCGACTCACCGGCATCGT CTCGCGCGGTGGCTCGATCCTGGCCAAGTGGTGTCTGGCGCATCATCAGGAGAACTTCCTCTACACCCATTTCGAGGAGA TCTGCGAGATCATGAAGGCCTATGACGTCGCCTTCAGTCTCGGCGACGGGCTGCGCCCCGGTTCGCTGGCCGATGCCAAC GACGCGGCGCAGTTCGCGGAGCTGGAGACCCTGGGCGAGCTGACCCAAGTCGCCTGGAAACACGACGTCCAGGTCATGAT CGAAGGACCGGGGCATGTGCCCTTGCAGATGGTCCAGGAGAACGTGACCAAGGAGCTGGCCGACTGCTTCGAAGCCCCCT TCTACACCCTTGGCCCGATCGTCACCGACATCGCACCGGCCTACGACCACATCACATCCGGCATGGGCGCGGCCAACATC GGCTGGTACGGCACCGCCATGCTCTGCTATGTCACGCCCAAGGAGCATCTGGGCCTGCCCAACAAGGAGGACGTGCGCGA GGGCATCATCACCTACAAGATCGCGGCCCATGCGGCGGATCTCGCCAAGGGGCTGCCGGGCGCGCAGATCCAGGACAATG CGCTGTCGAAGGCGCGCTTCGAGTTTCGCTGGGAGGATCAGTTCAATCTCTCGCTCGATCCCGAGCGCGCGCGGGAGTAT CACGATGCGACCCTGCCGCATCAGTCGCACAAGGTCGCGCACTTCTGTTCGATGTGCGGCCCGCACTTCTGCTCGATGAA GATCACCCAGGACGTGCGCGACTATGCCGCCAATCAGCGCATCGAGAACCTGGATACCGCCGTCGCGGAAGGGATGCGCG AGAAGGCGCGCGAGTTCCGCGAGGACGGCGCGGCGATCTACAAGGCGGTCTGA Protein sequence : MSAIPHDFVRKTAQLSEEVTRPFPNSRKVHVTGSRPDIRVPMREVTLTPTQTNQEPEENPPILIYDTSGPYTDPEARIDL LAGLPDIRSGWIAEREDTEQLDGPTSAFGRGRQNDPQLAHLRFEHLRTPRRAKSGRNVTQMHYARQGIITPEMEYVAIRE NMRLDELRADPRYAKLLRQHPGQSFGAAIPETITPEFVRDEIACGRAIIPANINHPELEPMIIGRNFRVKINTNIGNSAL TSSIEEEVEKMVWSARWGGDTLMDLSTGKHIHETREWILRNAPMPIGTVPIYQALEKVDGKPEELSWEIVRDTLIEQAEQ GVDYFTIHAGVLLRYVPLTADRLTGIVSRGGSILAKWCLAHHQENFLYTHFEEICEIMKAYDVAFSLGDGLRPGSLADAN DAAQFAELETLGELTQVAWKHDVQVMIEGPGHVPLQMVQENVTKELADCFEAPFYTLGPIVTDIAPAYDHITSGMGAANI GWYGTAMLCYVTPKEHLGLPNKEDVREGIITYKIAAHAADLAKGLPGAQIQDNALSKARFEFRWEDQFNLSLDPERAREY HDATLPHQSHKVAHFCSMCGPHFCSMKITQDVRDYAANQRIENLDTAVAEGMREKAREFREDGAAIYKAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 75 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 72 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 72 |
