Gene Information

Name : Alvin_0557 (Alvin_0557)
Accession : YP_003442539.1
Strain : Allochromatium vinosum DSM 180
Genome accession: NC_013851
Putative virulence/resistance : Resistance
Product : acriflavin resistance protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0841
EC number : -
Position : 640256 - 643351 bp
Length : 3096 bp
Strand : -
Note : PFAM: acriflavin resistance protein; KEGG: abo:ABO_2630 AcrB/AcrD/AcrF family transporter

DNA sequence :
ATGGATCTGACCGGATACACCCTGCGCAACCGCACCGTCTCCTGGATGGTGGTGCTGCTGCTGATCGGCGGCGGCGTGTC
CGCCTTCCTCGGCCTCGGGCGGCTGGAAGATCCGGCCTTCACCATCAAAGAGGCGATGATCCTGACCAGCTATCCCGGCG
CCTCGTCGCTGGAGGTGGAAGAAGAGGTCACGCTGCCGCTGGAAGAGGCGCTGCAACAACTGCCCTATGTCGATCACATC
ACCTCGACCTCTAGCGACGGCTACTCGCAGATCGAGGTGCAGATGCGCAGCATCTACCGCAAGGCGGCGCTGGCGCAGAT
CTGGGACGAGATGCGGCGCAAGATCAACGATGCGACCGGCCGGTTGCCTCCAGGGGTTCAGGCGCCACAGATCATCGATG
ACTTCGGCGATGTCTACGGCGTCTTTCTCGCCGTCACCGGCTCCGGCTATCGCTACGACGAACTGGATGACTATGTCGAC
TTCCTGCGCCGCGAGCTGATCGTGGTGCCGGGGGTGAGCAAGGTCAGCGTCGGCGGCACTCGCGAGGAGCAGGTCTTCAT
CGAGGTCGATCGCGCCAAGCTTGCGGCGACCGGTTTCGGCCTGTCGGATATCGAGGCTCTGCTGCGCGATCAGAATCTGG
TCGGGGATGCCGGGGATATCCGAGTCGGTACCGAATCGGTGCGTGCTCGCTCGCGCAGCGACAACGGCGACGGGTTGTCG
CGGCTGCGAGATCTGCTGGTGGGCCAGGTGGACGGTCAGGTGGTCTACCTGCGCGATGTGGCGCGCGTGACCCTGGGCTA
TACCGAACCGCCCTCGCATCTGTACCGCTTCGATGGCCAGCCGGCGCTCGGCGTAGGCATCTCGTTTCGCGCCGGGGTCA
ATGTCGTCGAGGTCGGCCAGGCCATTGAGGCGCGTCTCGCCGCGCTCGCACCCGAGCGCCCGCTCGGCATCGCGATCACC
AGCATCTACAACCAGCCGGCGGCGGTGGCGCAATCGGTCGATACCTTCCTGGTGGGGCTGGCGCAGGCGGTGGGCATCGT
GGTTGCGGTCCTGCTGTTCACCATGGGACTGCGCCCCGGCATCCTGATGAGCGGCGTCTTGCTGCTGACCATCCTCGGCA
CCTTCATCCTGATGGGTATCACCGGCATCGAGCTGCACAGGATCTCGCTCGGGGCACTGATCATCGCGCTGGGCATGCTG
GTCGATAACGCCATCGTCATCACCGAGGGCATCCTGATCGGGGTCAAGCGCGGCCTGACCCGAGTCGAGGCCGCCATGCG
GATTGTGAGCCACACTCGCTGGCCGCTGCTGGGCGCCACCCTGATTGCGATCACGGCCTTTGCGCCGATCGGACTCTCTC
CGGACGTCAGCGGCGAGTTCACGGGCAGCCTCTTCTGGGTGCTGCTGATCTCGCTGCTGTTGAGCTGGGTACTGGCCATC
ACGCTGACGCCGTTCTTCAGCGTGCTGATGTTTCGCGAGCAACCGGCGGCCAAAGACGGCGAGGTGTTCGCGCCGGCGGA
CCCCTACGCCGGTGTCTTCTATCGACTGTACCGCAAGATCCTGCGCCTGTGTCTGCGTTTTCGCTGGGGAACCATGGCCC
TGATGATCGCCGCACTGCTGGCCGCCGTGCTGGGCTTTGGCCAGGTCAAGAACGCCTTCTTCCCGGCCAGCTCGCTGCCG
ATGTTCATGGTTGACTACTGGTTGCCCCAGGGCAGTGACATCCGCGCCGTGGAGGCCGATGTCGCCCAGCTGGAGGCGGA
GCTACTGGCGTTTCCGGCGGTACGCCATGTGACCGCCACCATCGGCCGCGGCGCCGAGCGTTTCATGCTCACCTATGCCC
CGGAGCTGAGCTATCCGAGCTACGCCCAGTTGATCGTCGAGGTCGACGACTTCGACTCAGTGGCGCCGACGATCGAAGCC
CTCGATCATCGGCTTCGGGAAGGTTATCCGCAGGCCTTCACCCGCATTCAGCGCTTCGAGATCGGCCCCAGTACCAAGGC
CAAGCTGGAAGCGCGCCTGATCGGCCCGGACCCGGAGGTGCTGCGTGACCGGGCCGATGCGATCATCGCCATCCTTGAGG
CCGAGCCGGGGGCCATCAACGTCCGGCACGACTGGCGCGAGCGGACCAAGGTCTATCAGCCCGTTCTGAACGAAGCCGAG
GCGCGTCGGCTCGGCATCACCCGCCAGAACCTGGATCAGGCACTGGCGATGACCACAGACGGCGTGCGCATCGGTCTCTA
TCGTTGGGGCAGCCGGCTGCTCCCCATCGTCATGCGCCCCCCCGAGACCGAGCGCGATCGGGTCGAGCAACTGGAGGATA
TCCTGGTCTACAGCCCGGTGAAGCAGGCCTATGTGAACGTTGGGCAGTTGGTGCTCGGTGCCGAGCTGGTCTGGGAGGAC
GCGCTCATCAAGCGTCGTGACCGTAAACGGACCCTGGTGGTGCAGGCCGACCCGGCGCCAGGACTCATGCCCTCGAAGCT
CCACGCCAGCGTCCGCAACGCGATCGAGGCGGTACCGCTACCGCCCGGCTACGCGCTGGAGTGGGGCGGCGAATATGAGG
CCCAGCAGGAGGCCAATGTTGCCGTGTTCGCCTTCGTCCCGCTCGGCGTGCTGATCATGATCGTGCTCACCGTGCTGCTG
TTCGGCTCGGCCAAGCAGACACTGGTGGTGTGGATCACCGTGCCGCTGTCGCTGATCGGCGTCACCGTCGGACTGCTCTC
GACCGGTGCACCCTTCAGCTTCATGGCTCTGCTGGCGCTCATCAGCCTCATCGGCATGCAGCTCAAGAACGGCATCGTGC
TGGTCGAGGAGATCAAGCGCCTGCGCGAGGAAGAAGGCGAGGACTGGCGGCCCGCCATCGTCGAGGCCGCCGTCAGCCGC
GTGCGCCCCGTGACCATGGCCGCCCTGACCACCATCCTTGGCATGCTGCCGCTGCTGGCCGATGTCTTCTTCAAGCCGAT
GGCCGTGACCATCATGTTCGGACTCGGCTTCGCGACGGTGTTGACGCTGTTCGTGGTGCCGGTGCTGTTTGCGCTCTTCT
ATGGGGTGAGCGATCGTCCTGCGCCCGACGGTGGTGCAACAGATTGCCTCGTGTGA

Protein sequence :
MDLTGYTLRNRTVSWMVVLLLIGGGVSAFLGLGRLEDPAFTIKEAMILTSYPGASSLEVEEEVTLPLEEALQQLPYVDHI
TSTSSDGYSQIEVQMRSIYRKAALAQIWDEMRRKINDATGRLPPGVQAPQIIDDFGDVYGVFLAVTGSGYRYDELDDYVD
FLRRELIVVPGVSKVSVGGTREEQVFIEVDRAKLAATGFGLSDIEALLRDQNLVGDAGDIRVGTESVRARSRSDNGDGLS
RLRDLLVGQVDGQVVYLRDVARVTLGYTEPPSHLYRFDGQPALGVGISFRAGVNVVEVGQAIEARLAALAPERPLGIAIT
SIYNQPAAVAQSVDTFLVGLAQAVGIVVAVLLFTMGLRPGILMSGVLLLTILGTFILMGITGIELHRISLGALIIALGML
VDNAIVITEGILIGVKRGLTRVEAAMRIVSHTRWPLLGATLIAITAFAPIGLSPDVSGEFTGSLFWVLLISLLLSWVLAI
TLTPFFSVLMFREQPAAKDGEVFAPADPYAGVFYRLYRKILRLCLRFRWGTMALMIAALLAAVLGFGQVKNAFFPASSLP
MFMVDYWLPQGSDIRAVEADVAQLEAELLAFPAVRHVTATIGRGAERFMLTYAPELSYPSYAQLIVEVDDFDSVAPTIEA
LDHRLREGYPQAFTRIQRFEIGPSTKAKLEARLIGPDPEVLRDRADAIIAILEAEPGAINVRHDWRERTKVYQPVLNEAE
ARRLGITRQNLDQALAMTTDGVRIGLYRWGSRLLPIVMRPPETERDRVEQLEDILVYSPVKQAYVNVGQLVLGAELVWED
ALIKRRDRKRTLVVQADPAPGLMPSKLHASVRNAIEAVPLPPGYALEWGGEYEAQQEANVAVFAFVPLGVLIMIVLTVLL
FGSAKQTLVVWITVPLSLIGVTVGLLSTGAPFSFMALLALISLIGMQLKNGIVLVEEIKRLREEEGEDWRPAIVEAAVSR
VRPVTMAALTTILGMLPLLADVFFKPMAVTIMFGLGFATVLTLFVVPVLFALFYGVSDRPAPDGGATDCLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1355 YP_001217299.1 AcrB/AcrD/AcrF family transporter Not tested VPI-2 Protein 3e-164 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alvin_0557 YP_003442539.1 acriflavin resistance protein BAC0519 Protein 0.0 54
Alvin_0557 YP_003442539.1 acriflavin resistance protein BAC0428 Protein 0.0 54
Alvin_0557 YP_003442539.1 acriflavin resistance protein BAC0526 Protein 0.0 51
Alvin_0557 YP_003442539.1 acriflavin resistance protein BAC0425 Protein 1e-164 44