Gene Information

Name : Alvin_0367 (Alvin_0367)
Accession : YP_003442360.1
Strain : Allochromatium vinosum DSM 180
Genome accession: NC_013851
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 432812 - 433705 bp
Length : 894 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: pfo:Pfl01_1025 site-specific tyrosine recombinase XerD

DNA sequence : 
ATGGACGACCGCGCACTGATCGAAGGCTTCGCCGACGCACTCTGGATGGAACGCGGCCTGAGCCGGAACACGCTCACCGC
CTATCAGTCCGATCTGCGTGCTTTCGCGCACTGGCTGAGCCAGGAGCGCGGGCGCACGCTGATCGCCGCCGAACGGGCCG
ATCTGCTCGACTATCTGGCCCGGCTCGCCAAGCAAGGCCGCAACCCGCGCTCCAGTGCACGCCTGCTGTCCTGTCTGCGC
CAGTTCTATCAGCATCTGCGCCGGCGCGGTCTGATCGAGGCCGATCCCAGCGCCCGCGTCGAGGCGCCCAAGCTTGGGCG
CCCGCTACCCAAGAGTCTGAGCGAAGCCGATGTCGAAGCCCTGCTCAACGCACCGGATACCGAAGACGCGCGCGGCCATC
GCGACCGCACTATGCTGGAGGTGCTCTATGCCAGCGGTCTGCGCGTGAGCGAACTGGTGAACCTCACCCCCAGTCAGGTC
AGCCTGACCCAGGGCGTGGTGCGCATCCTCGGCAAGGGCGGCAAGGAGCGTCTGGTGCCGCTCGGCGAGGACGCCTGCAA
CTGGCTGCGCGACTATGTGCGTGGTCCCCGGTTCGACATCCTCGGCGGCCGGGCCAGCGACTTCCTGTTCCCGACCCGCC
GCAGTGACTGCATGACGCGCCAGGCGTTCTGGCAGCTCATCAAGCGCTATGCCATTCTGGCCGGGGTCGCCAAACCGCTC
TCGCCTCACACCCTGCGCCACGCCTTCGCCACCCATCTGCTCAATCATGGCGCCGATCTGCGCGTGGTGCAGATGCTGCT
CGGCCACAGCGATCTCTCGACCACCCAGATCTACACGCATGTGGCGCGCGAGCGGCTCAAGCAGCTCCATGCCCGTCATC
ATCCGCGCGGCTGA

Protein sequence : 
MDDRALIEGFADALWMERGLSRNTLTAYQSDLRAFAHWLSQERGRTLIAAERADLLDYLARLAKQGRNPRSSARLLSCLR
QFYQHLRRRGLIEADPSARVEAPKLGRPLPKSLSEADVEALLNAPDTEDARGHRDRTMLEVLYASGLRVSELVNLTPSQV
SLTQGVVRILGKGGKERLVPLGEDACNWLRDYVRGPRFDILGGRASDFLFPTRRSDCMTRQAFWQLIKRYAILAGVAKPL
SPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARERLKQLHARHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-65 53
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-65 53