|
Name : Alvin_2842 (Alvin_2842) Accession : YP_003444780.1 Strain : Allochromatium vinosum DSM 180 Genome accession: NC_013851 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 3217066 - 3218085 bp Length : 1020 bp Strand : + Note : KEGG: noc:Noc_2788 sugar phosphate isomerase involved in capsule formation, KpsF/GutQ; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein DNA sequence : ATGACTGAACGACGACGACTCGGCACACCGCCGGCTGTGCTCTCACCCGAGCAGGCCGGCCAGATCAAACGCCTCGGGCG CGCTGTGATCGAGACCGAGGCCAGCGCCGTGGCGGCGCTCGCCGAACGCCTGGACGACGCCTTCGTCGCCGCCTGCGGCC ACATGCTCGCCTGTGACGGGCGCATCGTGGTGCTCGGCATGGGCAAGTCCGGCCACATCGGCGGCAAGATCGCCGCCACC CTGGCCAGCACCGGCAGTCCGGCCTTCTTCGTCCATCCCGGCGAGGCCAGCCACGGCGATCTGGGCATGATCACCCCGCG TGACGTGGTGCTGGCCATCTCCAACTCGGGCGAGACCGCCGAACTGTTGACCATCCTGCCGCTCATCAAGCGGCTTGGCG TCCCCCTGATCGCCATGACCGGGCGGCGCGAGTCCACGCTGGCACACGAGGCCGATGTCCATCTCGATATCAGCGTCGCC ACGGAGGCCTGTCCGCTCGGTCTGGCGCCGACCTCCAGCACCACGGCGGCCCTGGCGATGGGCGATGCGCTGGCCATCGC GCTCCTGGAGAGCCGCGGCTTCACCGCCGAGGACTTCGCGCGCTCGCATCCGGCCGGCACGCTCGGACGGCGCCTGCTGC TGCACGTCGACGACGTGATGCACCAGGGCGAACGCCTGCCCTGGGTGGCGCTCGGCACGTCGCTACTCGATACGCTCGAA GAGATCTCACGCAAGGGGTTGGGCATGAGCGCCGTGGTGAACCCGGATGGCACCCTGGCCGGTGTCTTCACCGATGGCGA CCTGCGCCGCGCGCTCGACCAGGGCATCGACGTCCATCACACATCGATCGATACGGTCATGACGCGCCAATGCGCCACCA TCCAGTCGGGCGCGCTGGCCGTCGAGGCCGTGCGTCTCATGGAGTCGCGCGCCATCAATGGCTTGCTGGTGGTCGACACT GGAGGGCGCCTGATCGGGGCGCTCAACATGCACGACCTGCTGCGCGCTGGAGTCGTCTGA Protein sequence : MTERRRLGTPPAVLSPEQAGQIKRLGRAVIETEASAVAALAERLDDAFVAACGHMLACDGRIVVLGMGKSGHIGGKIAAT LASTGSPAFFVHPGEASHGDLGMITPRDVVLAISNSGETAELLTILPLIKRLGVPLIAMTGRRESTLAHEADVHLDISVA TEACPLGLAPTSSTTAALAMGDALAIALLESRGFTAEDFARSHPAGTLGRRLLLHVDDVMHQGERLPWVALGTSLLDTLE EISRKGLGMSAVVNPDGTLAGVFTDGDLRRALDQGIDVHHTSIDTVMTRQCATIQSGALAVEAVRLMESRAINGLLVVDT GGRLIGALNMHDLLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 4e-49 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-49 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 8e-49 | 43 |
