Gene Information

Name : Alvin_2534 (Alvin_2534)
Accession : YP_003444476.1
Strain : Allochromatium vinosum DSM 180
Genome accession: NC_013851
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 2866558 - 2868711 bp
Length : 2154 bp
Strand : -
Note : KEGG: tau:Tola_0241 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: DEAD-like helicase ; helicase doma

DNA sequence :
ATGCCTGACGCCGGCGTCAGCGACGGCGTGTCCGATCCGGCCGCCTTGGCGCCGGAGGCCGGGCGGTCGTCGGATCGCGG
GCTGGACCGGATTCCGGCACGCACGCTCGATCGGGTCGGGCCGAAGATCGCCGAGCGGCTCGAACGGCTCGGCATCCGCA
CGGTTCAGGATCTGCTGTTCCATCTGCCGCTGCGCTATCAGGATCGCACCCGGCTGACGCCGCTCACCGAGATCGAAGTC
GGAGTCGAGACCTGGGTCGAGGGCGAGATCCTCGAATCCGGCATCGGCCTGGGGCGGCGGCGCTCGCTCAAGGTCTGGGT
CGGGGATGCGCTCGGCGCCGGGCTGCTGCTGCGCTTCTTCTATTTCTCACCCCAGCAGGCCGCCGCGCTCAAGCCCGGCG
AGCGGGTGCGCTGCTATGGCGAGGTGCGCCAGGGGCCGCAGTCGCTGGAGATGGTGCATCCCGAATACCGTCTTCTGCGC
GCCGAGGCCGATGAGCCGATCGCCGCCTGTCTCACTCCCATCTATCCCTCGACCGAGGGGCTTCAGCAAACGAGCTGGCG
CGGTCTGACCGATCAGGCGCTGGCGCTCATGGAACGCACCGCGCCGGCCGAACTGCTGCCGCCCGAGATCCTCGACCCCC
TGGGCCTGCCGACTCTGACCGAGGCGCTGGCCTTTCTGCACCGTCCGCCGGTCGGCACATCGCTCCAGGATCTGACCGAG
GGCCGGCATCCGGCCTTCGCTCGGCTGGCCTTCGAGGAACTGGTCGCGCATCAGGTGAGTCTGCGCCGGATGCGGCTGGA
ACAGCGGCGTGTCTCAGCGCCGGTGCTGGGCGGCGATGGCGGCTTGCGCGAGCGTTTGCGGGCCAGTCTGCCGTTTCGGC
TCACCGCGTCGCAGGAGCGGGTGGTGGCCGAGATCGCGGCCGATCTGGCGCAGTCACGGCCGATGCAGCGGCTGCTCCAG
GGCGACGTGGGCGCGGGCAAGACGGTGGTGGCGGCGCTGGCCGCGCTCCAGGCGCTGGAGTCGGACTGTCAGGCCGCGCT
CATGGCGCCGACCGAGCTGCTGGCCGAGCAGCATCATCGCAGTCTGAGCGGCTGGCTCGGTGCGCTCGGACTCGAACCCG
TGTGGCTGGCCGGGCGTCACAAGGGGCGCGAGCGTGATGAGCGGCTGGCGGCGATCGCCTCGGGCGCGGCGCCGATCGTG
GTCGGCACCCATGCGCTGTTGCAGGACGACGTGGCGTTTCAGGATCTGGGGCTGGTCATCATCGACGAGCAGCATCGTTT
CGGCGTCCATCAGCGGCTGAAACTGCGTGAGAAGGGCGGGGGCGAGGACGGGGCGCCGCATCAGCTCATCATGACCGCGA
CGCCGATTCCGCGCTCGCTGGCGATGACGCTCTATGCCGATCTGGATCTGTCGGTGATCGACGGGCTGCCGCCCGGACGC
ACGCCGATCGTCACCCGCGCGGTGCCGGATACGCGGCGCGATGAGGTCATCGAGCGGGTGCGTCAGGCGTGTCTGGCGGG
GCGTCAGGCGTATTGGGTCTGTACGCTGATCGAGGAGTCGGAGGTGCTGGAGTGTCAGGCGGCGGAGGATACGGCACGTC
AGTTGAGCGCGTGTTTGGAGGGATTGCGGGTCGGGCTGGTGCATGGTCGGCTCAAGAGCCAGGAACGGGATGCGGTGATG
GCGGCGTTTGCGTCCGGGGCGCTGGATCTGCTGGTGGCGACCACGGTGATCGAGGTTGGGGTCGATGTGCCGAATGCCAG
TTTGATGATTATTGAAAATCCGGAGCGGTTGGGGTTGGCGCAGTTGCATCAATTACGCGGTCGGGTTGGGCGTGGGTCGG
TGGAGAGTCATTGTCTGCTGCTCTATCACGCGCCGCTGTCGGCGATTGCGCGTGAGCGGCTGGGGATCATTCGTGATTCG
ACCAGTGGGTTTGAAATCGCTGAGCGTGATTTGGCGATTCGGGGGGCGGGTGAGGTGTTGGGGACGCGCCAGACGGGGAG
TATTCAATTTCGGATTGCCGATCCGTTGCGGGATCAGCCGTTGATTGCCGAGGCGCAGCGGGCGGCGGATCGGCTGCTGG
TGGGGTATCCCGAACTCGTTACGCCGTTGATTGATCGGTGGCTGGGGGAGCGGGAGCATTATGGTGGGGTTTGA

Protein sequence :
MPDAGVSDGVSDPAALAPEAGRSSDRGLDRIPARTLDRVGPKIAERLERLGIRTVQDLLFHLPLRYQDRTRLTPLTEIEV
GVETWVEGEILESGIGLGRRRSLKVWVGDALGAGLLLRFFYFSPQQAAALKPGERVRCYGEVRQGPQSLEMVHPEYRLLR
AEADEPIAACLTPIYPSTEGLQQTSWRGLTDQALALMERTAPAELLPPEILDPLGLPTLTEALAFLHRPPVGTSLQDLTE
GRHPAFARLAFEELVAHQVSLRRMRLEQRRVSAPVLGGDGGLRERLRASLPFRLTASQERVVAEIAADLAQSRPMQRLLQ
GDVGAGKTVVAALAALQALESDCQAALMAPTELLAEQHHRSLSGWLGALGLEPVWLAGRHKGRERDERLAAIASGAAPIV
VGTHALLQDDVAFQDLGLVIIDEQHRFGVHQRLKLREKGGGEDGAPHQLIMTATPIPRSLAMTLYADLDLSVIDGLPPGR
TPIVTRAVPDTRRDEVIERVRQACLAGRQAYWVCTLIEESEVLECQAAEDTARQLSACLEGLRVGLVHGRLKSQERDAVM
AAFASGALDLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSVESHCLLLYHAPLSAIARERLGIIRDS
TSGFEIAERDLAIRGAGEVLGTRQTGSIQFRIADPLRDQPLIAEAQRAADRLLVGYPELVTPLIDRWLGEREHYGGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-101 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alvin_2534 YP_003444476.1 ATP-dependent DNA helicase RecG BAC0356 Protein 1e-180 59