Name : Alvin_0211 (Alvin_0211) Accession : YP_003442210.1 Strain : Allochromatium vinosum DSM 180 Genome accession: NC_013851 Putative virulence/resistance : Virulence Product : capsule polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3563 EC number : - Position : 226010 - 228010 bp Length : 2001 bp Strand : - Note : PFAM: Capsule polysaccharide biosynthesis protein; KEGG: bmj:BMULJ_00622 putative capsule polysaccharide export protein DNA sequence : ATGATTGGAGTTCTTTCACGCGGGATCCTGCGGATTCCTGGGCTGGAGGTCGTGCTTGGAGAGCCTGTCGTCGCCGTGAG TCCATGGCGCGCTCGCCCGGAGCTGTCGGCTATTGCAGGCTGGGGCCTGAAAGCGACCTCGCGCCGGGCGCGTGACTATG CGCGCCGCCATGGTCTGCCCTATCTGGCGCTGGAAGACGGATTTCTGCGCTCGGTCGGACTCGGCAACCAGGATCCACCG CTGTCGCTGATCGTCGACGACCTGGGTGTCTACTATGATGCAACGCGCCCATCGCGTTTGGAAACACTGATCCGGCATCC GCTGTCCGACACCGAGACCGCGCGCGCGCGGTCCTTGCGCTCGGCCTGGTGCGCGGCGCGGGTATCGAAGTACAACCATT TGCGCGAAGAGCGCGAACCCCTGCCCTCCCCCGCCGTACTGGTGGTCGATCAGACCTTTGGCGATCCGGCCATCACCCAT GGTCTGGCCGACTCGAAAAGCTTCCAGCACCTGCTGGAAGCGGCACTGGACGAGAATCCCCGGGCCGTCATTCTCGTAAA GATCCATCCCGACGTCTTCGCCGGACGCAAGCGCGGTCATTTCGATCCCGAGCGGCTCGCCAGGCTGGAGCGGGTGCGGC TGCTGACACGCGATCTGCATCCGGTATCGCTCCTGGAACGGGTCGAGACGGTTTACACGGTCACCTCACAGCTCGGCTTC GAAGCGCTGCTCTGGGGGCGGCGGGCGCGTGTCTTCGGGATGCCATTCTACGCCGGCTGGGGGCTGACCGAGGACGAGTT GCCCAGGCTGGAACGACGGGCGCCGGTCGGCCTGGAGTCCCTGATCCATGGAGCACTGATCGCCGCTCCACGTTATCTGG ATCCTGAAACCGGCGAACGCTGCGAGATCGAGCGCGTGCTGGAGTGGATGGGTTTGCAGCGACGGATGCGCGAGCGCTTT CCCGAAACGATCCGGGCACTGAATTTTTCGGCTTGGAAACGTCCGCTGGTACGACGCTTCATGCAGGGGAGCCGGGTCGA ATTCGAGACCAGACCTCATGATGCAAGACAGATCAAGGGCGATGCTCGCATCCCGTTGGCGGTGTGGGGTCTGGCGGCGG CGCCCGAAGGTCGGACCATCCTGCGCCTGGAGGATGGCTTCTTGCGCTCGGTGGGCCTGGGGGCGGATCTGGTCGAGCCG TTGTCCTGGGTCATCGATCAGCGTGGGCTCTACTATGATCCGAGCCGACCCTCAGATCTGGAGATCCTGCTCGAAACCCA GGTCTTCGACGAGGCGCTACTGGAGCGTGCGCGAAGATTGCGCGAGCGGATCGTCGCCTCGGGCTTGACCAAGTACAACG TCGGCGCGGCGCACTGGCAACGTCCGGCGACCGCCAGACGGGTGATCCTGGTGCCGGGACAGGTGGAGACGGATGCCTCG ATCCGGCTCGGCGCGCCTGGCATCCGGCACAATCTGGAGCTGTTGCGGGCCGTGCGCGAAGCCCATCCCGACGCCTATGT TCTCTACAAGCCGCATCCGGATGTCACGGCCGGCTTGCGCGCGGCTGGTGAGCACGAGTCTGCCGCACGCACTTGGTGTG ACGAACTGATCGTCGATGTGCCCATGGCGACCTTGCTCGATGCGGTCGATGAACTGCATGTACTCACCTCGCTGGCAGGC TTCGAGGCGCTGCTGCGCGGCAAACGGGTCGTCTGTCATGGTCAGCCGTTCTATGCCGGCTGGGGGCTGACCGAGGACCG TTTGCCCCCGGCGCGCCGCACGCGTCGCCTGTCGCTGGAGATGTTGGTGGCCGGCGCGCTTCTGCTCTATCCGACCTATG TCAGTCGGGTGACGAGCCGCTTCACGACCGCCGAGCACGCGCTCGACGAGCTGCTGGAATGGCGCGCGCGGGGCGAGCGA CTGACGTTTTGGCGCCGGGTGTTCGTGCGTCCGGTGCTGGGACGGCTGGCCGCCCTGCGCGACCGGCGTCCAAGCGGCTG A Protein sequence : MIGVLSRGILRIPGLEVVLGEPVVAVSPWRARPELSAIAGWGLKATSRRARDYARRHGLPYLALEDGFLRSVGLGNQDPP LSLIVDDLGVYYDATRPSRLETLIRHPLSDTETARARSLRSAWCAARVSKYNHLREEREPLPSPAVLVVDQTFGDPAITH GLADSKSFQHLLEAALDENPRAVILVKIHPDVFAGRKRGHFDPERLARLERVRLLTRDLHPVSLLERVETVYTVTSQLGF EALLWGRRARVFGMPFYAGWGLTEDELPRLERRAPVGLESLIHGALIAAPRYLDPETGERCEIERVLEWMGLQRRMRERF PETIRALNFSAWKRPLVRRFMQGSRVEFETRPHDARQIKGDARIPLAVWGLAAAPEGRTILRLEDGFLRSVGLGADLVEP LSWVIDQRGLYYDPSRPSDLEILLETQVFDEALLERARRLRERIVASGLTKYNVGAAHWQRPATARRVILVPGQVETDAS IRLGAPGIRHNLELLRAVREAHPDAYVLYKPHPDVTAGLRAAGEHESAARTWCDELIVDVPMATLLDAVDELHVLTSLAG FEALLRGKRVVCHGQPFYAGWGLTEDRLPPARRTRRLSLEMLVAGALLLYPTYVSRVTSRFTTAEHALDELLEWRARGER LTFWRRVFVRPVLGRLAALRDRRPSG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 2e-101 | 44 |
kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 3e-101 | 44 |
lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 7e-115 | 43 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Alvin_0211 | YP_003442210.1 | capsule polysaccharide biosynthesis protein | VFG0259 | Protein | 3e-115 | 43 |
Alvin_0211 | YP_003442210.1 | capsule polysaccharide biosynthesis protein | VFG0704 | Protein | 4e-96 | 42 |
Alvin_0211 | YP_003442210.1 | capsule polysaccharide biosynthesis protein | VFG0692 | Protein | 1e-112 | 41 |