Gene Information

Name : Alvin_0179 (Alvin_0179)
Accession : YP_003442180.1
Strain : Allochromatium vinosum DSM 180
Genome accession: NC_013851
Putative virulence/resistance : Unknown
Product : DEAD-like helicase
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 188897 - 190954 bp
Length : 2058 bp
Strand : +
Note : SMART: DEAD-like helicase; KEGG: ajs:Ajs_2529 hypothetical protein

DNA sequence :
ATGAGCGACACGATCAAGGCCGTCCCGTCCATCTCCGTCACCTATGCCCGCAAAGGCGTCTCGACGAAGGCTAATGCCCT
GGGAATGCGCCCTATGCAGGAGCGCGCTTACGAGAAGCGGGGCGAGCAATATCTACTGATCAAGTCACCGCCCGCCTCCG
GCAAGAGCCGCGCGCTCATGTTCATCGCGCTCGACAAACTGCACAACCAAGGCTTGAAGCAAGCCATCATCGTCGTGCCG
GAAAAGACCATCGGGGCCAGCTTCAACGACGCGCCACTGTCCCAGTTCGGTTTCTGGTCCGACTGGCAGGTCGAACCCAA
GTGGAACCTATGCAACGCACCGGGCAATGACAACGGCGGAAAGGTCAAGTCACTCGGCGCATTCCTCGAAAGCGACGACA
GGGTACTGGTCTGCACTCACGCGACGTTCCGCTTCGCGGTCGATGCCTACGGCGTCAAAGCCTTCGACAACCGTCTGATT
GCGGTCGATGAGTTCCACCACGTTTCGGCTAATCCAGACAACAAGCTCGGCCTGCACCTAGGGCAGTTCATCGCACGCGA
CAAGACACACATCGTCGCCATGACCGGCTCCTACTTCCGGGGCGACGCTGAAGCCGTTCTGCCCCCAACGGACGAAGCCA
AGTTCGATACCGTCACCTACACCTATTACGAACAGCTCAACGGCTACGATTACCTCAAGCAACTCGACATCGGCTACTTC
TTCTACAGCGGGTCGTATGTCGACGACATCCTCAACGTCCTCGACCCCAACGAGAAGACGATCATCCACATTCCCAACGT
CAATTCACGCGAAAGCACGAAGGACAAGATGCGGGAGGTGGAGCACATCATCGAGGCACTCGGCGAATGGCAGGGCATCG
ACATCGCCACTGGCTTCCAGCTCGTCAAACAGCCTAACGGACGGGTACTGAAAATCGCCGATCTGGTAGATGACGAGGCG
ACGAAGCGCGATCGAGTGTCTACCGCCCTCAAAGACCCAGCGCAGAAGGACAACCGCGACCATGTAGACATCATCATCGC
CCTGGGCATGGCCAAGGAAGGCTTCGACTGGATTTGGTGCGAGCACGCGCTGACCGTGGGGTATCGCGCCAGCCTAACCG
AAATCGTCCAGATCATTGGCCGAGCCACACGCGACGCTCCCGGCAAGACCAGGGCGCGCTTCACCAACCTGATCGCTGAG
CCGGATGCCTCTGAGAAAGCCGTCACCGAGGCCGTCAATGACACCCTGAAGGCCATCGCCGCCAGCCTGCTGATGGAGCA
GGTGCTTGCCCCACGCTTCGAGTTCAAGCCCAAGAACCCCGACACCGGCCCGACACCCGGCTTCGACTATGGCGAGGGCG
GCTATGACCCGAGCCGGTGCAATGTCGGTGTCAATGAGCAGACGGGGGCGTACCAGATCGAGATCAAGGGACTGGCCGAA
CCCAAGAGCCAGGAGGCGGTACGCATCTGTCAGGAGGATCTGAACGAGGTGATCGCCACCTTCATTCAGGACAAGACCAC
CATCGAGCGCGGCCTGTTCGACGAAGAACTCGTGCCGGAGGAACTGACACAGGTTCGTCTGGGCAAGATCATCAAAGACA
AATACCCCGAACTGGATACCGAGGATCAGGAAGCCGTGCGCCAGCACGCTATTGCCGCACTCACGCTGACACAGCAGGCC
AAGCAGCGTGTGATCGGTGGCGAGAGCGACGAGGCGAAGCCCAACACGGCTCTGATCAACGGCGTGCGTCGCTTCGCGAT
GGATGTCCGCGACCTGGACATCGACCTCATCGACCGCATCAACCCCTTCGGCGAAGCCTACGCCATCCTTGCCAAAACCA
TGAGCGAGGACAGCTTGAAGCAGGTCGCAGCCGCCATCTCCGCCAAACGTGCGAACCTGACGCCAGAGGAAGCGAAGGAG
TTGGCGATCCGCGCTGTCCAGTTCAAAAAGGAACGGGGACGGGTGCCCGCGCTCGACTCACAGGATGCGTGGGAGCGACG
CATGGCTGAAGGTGCAGCCGCCTTCATGCGCTACAAGAAGGAGGGGCGCTATGAGTGA

Protein sequence :
MSDTIKAVPSISVTYARKGVSTKANALGMRPMQERAYEKRGEQYLLIKSPPASGKSRALMFIALDKLHNQGLKQAIIVVP
EKTIGASFNDAPLSQFGFWSDWQVEPKWNLCNAPGNDNGGKVKSLGAFLESDDRVLVCTHATFRFAVDAYGVKAFDNRLI
AVDEFHHVSANPDNKLGLHLGQFIARDKTHIVAMTGSYFRGDAEAVLPPTDEAKFDTVTYTYYEQLNGYDYLKQLDIGYF
FYSGSYVDDILNVLDPNEKTIIHIPNVNSRESTKDKMREVEHIIEALGEWQGIDIATGFQLVKQPNGRVLKIADLVDDEA
TKRDRVSTALKDPAQKDNRDHVDIIIALGMAKEGFDWIWCEHALTVGYRASLTEIVQIIGRATRDAPGKTRARFTNLIAE
PDASEKAVTEAVNDTLKAIAASLLMEQVLAPRFEFKPKNPDTGPTPGFDYGEGGYDPSRCNVGVNEQTGAYQIEIKGLAE
PKSQEAVRICQEDLNEVIATFIQDKTTIERGLFDEELVPEELTQVRLGKIIKDKYPELDTEDQEAVRQHAIAALTLTQQA
KQRVIGGESDEAKPNTALINGVRRFAMDVRDLDIDLIDRINPFGEAYAILAKTMSEDSLKQVAAAISAKRANLTPEEAKE
LAIRAVQFKKERGRVPALDSQDAWERRMAEGAAAFMRYKKEGRYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0715_00996 YP_008216144.1 hypothetical protein Not tested AbaR27 Protein 3e-85 45
CDPW8_0255 YP_005141822.1 putative ATP-dependent helicase Not tested Not named Protein 2e-94 45