Gene Information

Name : Alvin_1772 (Alvin_1772)
Accession : YP_003443733.1
Strain : Allochromatium vinosum DSM 180
Genome accession: NC_013851
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 2032335 - 2033480 bp
Length : 1146 bp
Strand : -
Note : KEGG: tgr:Tgr7_1559 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
ATGGCGCTGTCGCGTCCAGCCACGGCCGGTGACGGAGACGATCGGCTTCACATGGCCCGCGCCATAGGCTTGGCTGAACG
CGGACGCTACACCACAGACCCCAATCCGCGCGTCGGTTGCGTGCTGGTGCGCGATGGGCAGGTGGTCGGCGAGGGTTGGC
ATCGTCGTGCCGGTGAGCCGCACGCCGAACCGCTGGCGCTGGCGCAGGCGGGTGAACGCGCGCGTGACGCCACGGTCTAT
GTGACCCTGGAACCCTGCTCGCATCACGGACGCACGCCCCCCTGTGCCGAGGCGTTGATCGCCGCTGGTGTGGCGCGTGT
CGTCTGTGCCATGGTCGATCCCAATCCGCGTGTGGCCGGTCGAGGCGTCGAGCGACTGCGTCAGGCCGGAATCTCGGTCG
ATGTCGGTTGCCTGGAGTCCGAGGCGCGTGCGCTCAATCCCGGCTTCGTCAAGCGCTATGAGCAGGGACGGCCCTATGTC
CGCTGCAAGCTGGCCGCGAGCCTGGATGGGCGCACGGCGCTGGCTACCGGCGAGAGCAAATGGATCACCTCCGAGGCGGC
GCGGCGCGATGTGCAGCGCTGGCGCGCCGGCAGTTCGGCCATCGTCACGGGGCTGGGGACGGTGCTGGGAGACGATCCGA
GCCTGAACGTGCGTCTGACGGCCGCTGAGCTGTCCGGCATGGCGGCAGACGACCCGGTGCGTCAACCTTGCCGCGTCGTG
GTCGACAGCCATTGGCGCACGCCGCCGACGGCGCGTTTGCTCGGCCTGCCGGGGCGCACGCTGATCGTCGGCATCGGTCC
GCGTGATACGGCCGCCGCCGCACTCGAAGCCGCCGGCGCCGAGTTGATCCGGTTGCCCGAGCAGGCCGGTCGCGTGGATC
TGGCGGCCCTGATGGCCGAGCTGGCACGGCGCGAGGTCAACGAAGTTCTGCTGGAGGCCGGATCGACCCTGTCGGGAGCG
GCGGTACGCGCGGGGCTGGTCGACGAGATTCTGCTCTATCAGGCGCCCTGTCTCATGGGGCAGGCGGCCAAGGGCTTGTT
CGATCTGCCCGGTATCGACACCATGCTCGACCGTGTCGGGCTGGAGATCCTGGAGGTGCGCTCTATCGGCCGGGATCTGC
GGATTCGTGCCCGTCCCGATCTATAG

Protein sequence :
MALSRPATAGDGDDRLHMARAIGLAERGRYTTDPNPRVGCVLVRDGQVVGEGWHRRAGEPHAEPLALAQAGERARDATVY
VTLEPCSHHGRTPPCAEALIAAGVARVVCAMVDPNPRVAGRGVERLRQAGISVDVGCLESEARALNPGFVKRYEQGRPYV
RCKLAASLDGRTALATGESKWITSEAARRDVQRWRAGSSAIVTGLGTVLGDDPSLNVRLTAAELSGMAADDPVRQPCRVV
VDSHWRTPPTARLLGLPGRTLIVGIGPRDTAAAALEAAGAELIRLPEQAGRVDLAALMAELARREVNEVLLEAGSTLSGA
AVRAGLVDEILLYQAPCLMGQAAKGLFDLPGIDTMLDRVGLEILEVRSIGRDLRIRARPDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-65 47
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-65 47