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Name : Alvin_1616 (Alvin_1616) Accession : YP_003443580.1 Strain : Allochromatium vinosum DSM 180 Genome accession: NC_013851 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1877506 - 1878780 bp Length : 1275 bp Strand : - Note : KEGG: aeh:Mlg_1699 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGCTAGACCCACGTTCGTTGCGCACCGAACTCGATCAGGTCGCCGAGCAACTGGCCCGGCGCGGTCTGGTGCTCGACAC CGCGCGGATCGAGTCCCTGGAGACCGAGCGCAAGGCGCTTCAGATCCAGGTTCAGGAACTCCAGAACACGCGCAACACGC GCTCCAAGTCGATCGGGCGCGCCAAGGCGGCCGGCGAGGACATCGCGCCGCTGCTGGCCGAGGTCGCCGATCTGGGCGAC CAGCTCAAGGCGGCCGAGTCGCGGTTGAGCGCGATCCAGGACGAGCTGACCGACATCAGTCTGAGCCTGCCCAATCTGCC GGCCGCCGAGGTTCCGGACGGGCGCGACGAGTCCGACAACCGCGAGGAACGCCGCTGGGGCACGCCGCCGGCATTCGACT TCGACCCCAAGGATCATGTCGACCTTGGGGCGCGCAACGGCTGGATGGACTTCGATCTGGCGGCCAAGGTGACGGGGTCG CGCTTCGTCACGCTCTCCGGCCCCATGGCGCGGCTGCATCGGGCGCTGATCCAGTTCATGCTCGACGTGCATACCGGCGA GCACGGCTATACCGAGACCTATGTGCCCTATCTGGTCAATGCCGACAGTCTGCGCGGCACCGGCCAGTTGCCCAAGTTCG AGGCCGATCTGTTCAAGGTGCCGGGCGAGCGCGATTTCTATCTGATCCCGACCGCTGAAGTGCCTGTGACCAATCTGGCG CGCGATCTGATCCTGGAGGCCGACAGTCTGCCGCGCAAATGGGTGGCGCATACGCCGTGCTTCCGCAGCGAGGCCGGTTC CTACGGCAAGGACACGCGCGGCATGATCCGTCAGCATCAGTTCGAGAAGGTCGAGCTGGTGCAGATCGTGCGGCCCGAGG ATGGGGCGCAGGCGCTGGAGGCGCTGACCGGGCATGCCGAGTCGATTCTGCAACGGCTGGGGCTGGCCTATCGGGTCGTG ACTCTGTGCACGGGCGATCTGGGGTTCTCGGCGCGCAAGACCTATGATCTGGAAGTCTGGCTGCCGGGGCAGGGCGCTTA TCGCGAGATTTCTTCGTGCAGCCATTTCGGGGACTTCCAGGCGCGTCGGCTCCAGGCCCGCTGGCGCAATCCCGAGACCG GCAAGCCGGAGTTGGTGCATACGCTCAATGGCTCGGGGCTGGCGGTCGGGCGGACCCTGGTCGCGGTGCTGGAGAACTAT CAGCAGGCCGATGGGAGTGTGGTCATTCCCGAGGTGTTGCGGCCTTATATGGGTGGGATCGAGCGGCTGTCTTAG Protein sequence : MLDPRSLRTELDQVAEQLARRGLVLDTARIESLETERKALQIQVQELQNTRNTRSKSIGRAKAAGEDIAPLLAEVADLGD QLKAAESRLSAIQDELTDISLSLPNLPAAEVPDGRDESDNREERRWGTPPAFDFDPKDHVDLGARNGWMDFDLAAKVTGS RFVTLSGPMARLHRALIQFMLDVHTGEHGYTETYVPYLVNADSLRGTGQLPKFEADLFKVPGERDFYLIPTAEVPVTNLA RDLILEADSLPRKWVAHTPCFRSEAGSYGKDTRGMIRQHQFEKVELVQIVRPEDGAQALEALTGHAESILQRLGLAYRVV TLCTGDLGFSARKTYDLEVWLPGQGAYREISSCSHFGDFQARRLQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENY QQADGSVVIPEVLRPYMGGIERLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-103 | 54 |
