|
Name : Alvin_1359 (Alvin_1359) Accession : YP_003443326.1 Strain : Allochromatium vinosum DSM 180 Genome accession: NC_013851 Putative virulence/resistance : Unknown Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1553297 - 1555894 bp Length : 2598 bp Strand : + Note : KEGG: tgr:Tgr7_0817 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase DNA sequence : GTGAGACAGGACAAACTGACCGCCAAATTCCAACTGGCCCTGGCCGACGCCCAGAGTCTGGCTCTGGGGCGCGATCATCA ATTCATCGAACCCGTCCATCTGATGGCCGCCCTGCTGGATCAGCAGGGCGGCACCATCCGCCATCTGCTCAACAAGGCCG ATGTCAACACCAACAAACTGCGCTCGGCGCTCGGCGAGGCGCTCGAACGGCTACCGACCGTGCAGGGTGTGGGCGGCGAC GTGCATGTGAGCAACGATCTCTCGCGTCTGCTCAACCTGACCGACAAGCTCGCCCAGCAGCGCAACGATCAGTACATCTC GTCCGAACTTTTCGTGCTCGCGGCACTGGAGGACAAGGGCACGCTCGGCAGTGCGCTGCGCGAGGCGGGCGCCAGCAAGA GCGCGATCGAGCAGGCGATCCAGACTGTGCGCGGCGGACAGTCTGTCAACGATCCCAACGCCGAGGAACAGCGTCAGGCG CTCGAAAAATACACCATCGATCTGACCGAGCGCGCCGAGCAGGGCAAGCTCGACCCGGTGATCGGACGCGACGACGAGAT CCGCCGCACCATCCAGGTGTTGCAGCGGCGCACCAAGAACAATCCGGTGCTGATCGGCGAGCCGGGCGTGGGCAAGACCG CCATCGTCGAGGGCCTGGCCCAGCGTATCGTCAATGGCGAGGTGCCCGAGGGTCTGAAGTCCAAGCGGCTGCTGGCGCTC GACATGGCCGCGCTCATCGCCGGTTCCAAGTTCCGGGGCGAGTTCGAGGAACGGCTCAAGGCGGTCCTGAACGATATCGC CCGTCAGGAGGGCAACGTCATCCTGTTCATCGACGAGCTGCACACCATGGTCGGCGCCGGCAAGGCCGAAGGCTCGATGG ACGCCGGCAACATGCTCAAGCCGGCGCTGGCGCGCGGCGAACTGCACTGCGTCGGCGCGACCACGCTCGACGAATATCGC AAGTACGTCGAGAAGGACGCCGCGCTCGAACGCCGCTTCCAGAAGGTGCTGGTCGACGAACCGAACGTCGAGGACACCAT CGCCATCCTGCGCGGATTGAAGGAACGCTACGAGGTCCACCACGCCGTTGAGATCACCGACACCGCGATCGTCGCCGCCG CCACGCTCTCGCATCGCTACATCGCCGACCGACAGTTGCCCGACAAGGCGATCGACCTGATCGACGAGGCCGCCTCGCGC ATCCGCATGGAGATCGATTCCATGCCCGAGGAGATGGACCGGCTCGACCGGCGCCTGATCCAGCTCAAGATCGAGCGCGA GGCGCTGAAGAAGGAATCCGACGAGGCGTCGCGCAAACGTCTGGCGGATCTGGAAGGTCAGATCGCGCGCCTGGAGCGCG AGTTCGCCGATCTCGACGAGATCTGGAAGTCCGAGAAGGCCGCCGTGCAGGGCACAGCGCACATCAAGGAAGCACTCGAC CGGGTGCGGCTGGAGATGGAGACCGCGCGCCGCGCCGGCGACTGGACGCGCATGTCCGAACTGCAATACGGCCGAGTCCC CGAGCTGGAGAAGCAACTGGCCGCGGCCTCCCAGGCCGAGCAGGGCGAGAATCGGCTCCTGCGCAACAAGGTCACGGACG AAGAGGTCGCCGAGGTCGTCTCCAAATGGACCGGCATTCCGATCTCCAAGATGCTGGAGGGCGAGCGCGACAAGCTGTTG CGCATGGAGTCCGAGATCGAACAGCGCGTGGTGGGTCAGAACGAGGCGGTGCGCGCCGTGAGCGACGCCATCCGCCGCTC GCGCGCCGGGTTGTCCGATCCGGGACGGCCGATCGGCTCCTTCCTGTTCCTCGGGCCGACCGGCGTCGGCAAGACCGAGC TGTGCAAGGCGCTCGCCGCCTTCCTGTTCGACACCGAGGAGGCCATGGTCCGCATCGACATGTCCGAGTTCATGGAGAAG CACTCGGTCGCCCGGCTCATCGGCGCGCCGCCCGGCTATGTCGGCTACGAGGAAGGCGGCTATCTGACCGAAGCCATCCG CCGTCGGCCCTACAGCCTGATCCTGCTCGACGAGGTCGAAAAGGCGCATCCGGACGTCTTCAATGTCCTGCTCCAGGTGC TCGACGACGGACGCCTGACCGACGGCCAGGGACGCACGGTCGATTTCCGTAACTCGGTCATCGTCATGACCTCCAATCTC GGTTCCGACATCATCCAGCAGCGCGCAGGCGAAGCGCACTATGCCGAGATGAAGGAAGCGGTGATGGAGAGCGTGCGTCA CGCCTTCCGCCCCGAGTTCATCAACCGTTTGGACGAAATCGTCGTCTTCCATCCGCTGCAACAGGCGCAGATCCGGGCGA TCGCGCGCATCCAGCTCGGCTATCTGCAACAGCGGCTCGCCGAGCGCGACATGAAGCTCGAAGTCAGCGACGCCGCGCTC GATCATCTCGGCGCGGCCGGCTTCGATCCGGTCTATGGCGCGCGGCCGCTCAAGCGCGCCATCCGCGCCCAGTTGGAGAA TCCGCTGGCGCAGCAGATCCTCTCGGGCAAATTCGGTCCGGGCGATCTGATCGAGGTCGGGTTGGCAGACGGCCAGCTCT CCTTCGAACGGGTGTTGCAGGGCGAGCTGGTCGACTGA Protein sequence : MRQDKLTAKFQLALADAQSLALGRDHQFIEPVHLMAALLDQQGGTIRHLLNKADVNTNKLRSALGEALERLPTVQGVGGD VHVSNDLSRLLNLTDKLAQQRNDQYISSELFVLAALEDKGTLGSALREAGASKSAIEQAIQTVRGGQSVNDPNAEEQRQA LEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKSKRLLAL DMAALIAGSKFRGEFEERLKAVLNDIARQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYR KYVEKDAALERRFQKVLVDEPNVEDTIAILRGLKERYEVHHAVEITDTAIVAAATLSHRYIADRQLPDKAIDLIDEAASR IRMEIDSMPEEMDRLDRRLIQLKIEREALKKESDEASRKRLADLEGQIARLEREFADLDEIWKSEKAAVQGTAHIKEALD RVRLEMETARRAGDWTRMSELQYGRVPELEKQLAAASQAEQGENRLLRNKVTDEEVAEVVSKWTGIPISKMLEGERDKLL RMESEIEQRVVGQNEAVRAVSDAIRRSRAGLSDPGRPIGSFLFLGPTGVGKTELCKALAAFLFDTEEAMVRIDMSEFMEK HSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSLILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNSVIVMTSNL GSDIIQQRAGEAHYAEMKEAVMESVRHAFRPEFINRLDEIVVFHPLQQAQIRAIARIQLGYLQQRLAERDMKLEVSDAAL DHLGAAGFDPVYGARPLKRAIRAQLENPLAQQILSGKFGPGDLIEVGLADGQLSFERVLQGELVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-108 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 4e-102 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-102 | 41 |
