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Name : Alvin_1283 (Alvin_1283) Accession : YP_003443254.1 Strain : Allochromatium vinosum DSM 180 Genome accession: NC_013851 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1470815 - 1472332 bp Length : 1518 bp Strand : + Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: tgr:Tgr7_1462 lysyl-tRNA synthetase DNA sequence : ATGAGCGACGCGCCATCAACCGCCACCGAGGCACTCGACGAGAACAAACTGATCGCCCAGCGGCGCGAGAAGCTGGCGCG GCTACGCGAGCGCGGCAACGCGTTCCCGAACGATTTCCGGCGCGATGCGCTGGCGGGCGACCTGCTGGCTCAGTACGAGG CGCTGGAGGCCGAGGAACTGGAAGCGCGTGCGGTGCGCGTCAAGCTGGCCGGTCGACTGATGACCCGGCGCGTCATGGGC AAAGCGAGCTTTGCGCACATCCAGGACATGTCGGCGCGCATCCAGGTCTTCGTCCAGCGCGATCAGGTCGGCGAAGAGAC CTACGACCACTTCAAGCGCGAGCTGGATCTCGGCGACATCATCGGCGTCGAGGGTCAGGTGTTCAAGACCAAGACCGGCG AGCTGTCGGTGCGCTGTGATTCGCTGCGTCTGCTGACCAAGGCGCTGCGTCCGCTGCCCGAGAAATTCCATGGTCTGACC GACATGGAGAGCCGCTATCGGCAGCGTTATCTCGATCTGATCATGAACACGGGCACGCGCGACACCTTCCGCGTGCGCAC CGCGATCGTGCAGTTCATCCGCGACTATCTCAACGGTCGCGGCTATCTGGAAGTCGAGACGCCGATGATGCAGGTGATTC CGGGCGGTGCGGTGGCGCGGCCCTTCATCACCCATCACAATGCGCTCGACATGCAGCTCTTCCTGCGCATCGCGCCCGAG TTGTTCCTCAAGCGGCTGGTGGTCGGCGGGTTCGAGAAGGTCTACGAGATCAACCGCAACTTCAGAAACGAAGGTCTCTC GACCCGGCACAACCCCGAGTTCACCATGCTGGAGTTCTACGAGGCCTATGCCGACTATCACGATCTGATGGATCTGACCG AGGACATGCTGCGCCGGATGGCGATCGAGGTGCTGGGCACGACTCAGATCCAGTATCAGGGCGCAAACTATGATTTCGGT CGGCCCTTCGCGCGGCTGAGCGTGCGTGACGCGATCCTCCAGTTCAATCCCGAGCTGACGGCGGCGGACGTCGACGACCT GGATCGCCTGCGCGCGGTGGTCGAGCGTCATGGCGTCGTACCCAAGGCGACCTGGGGGTTGGGCAAGCTGCAAGTCGAAC TCTTCGAGCAGACGGTCGAGAGCCGGCTGATGGACCCGACCTTCATCACCCGCTATCCGACCGAGGTCTCACCGCTGGCG CGGCGCAATGACGAAGACCCAAGCGTCACTGACCGCTTCGAGCTCTTCGTCGGCGGACGCGAGATCGCCAACGGTTTCTC GGAGTTGAACGACGCCGAGGATCAGGCCGAGCGCTTCCGCGCCCAGGTGGCCGAGAAGGAGGCCGGCGACCAGGAGGCCA TGTACTATGACGCCGACTATGTCCGCGCCCTAGAGCACGGTCTGCCGCCGACGGCGGGCGAGGGCATCGGCATCGACCGG CTGGTGATGCTCTTCACCGACTCGCCCTCGATCCGCGACGTGCTGCTGTTCCCGCACATGCGCCCGGAGTCGATCTAG Protein sequence : MSDAPSTATEALDENKLIAQRREKLARLRERGNAFPNDFRRDALAGDLLAQYEALEAEELEARAVRVKLAGRLMTRRVMG KASFAHIQDMSARIQVFVQRDQVGEETYDHFKRELDLGDIIGVEGQVFKTKTGELSVRCDSLRLLTKALRPLPEKFHGLT DMESRYRQRYLDLIMNTGTRDTFRVRTAIVQFIRDYLNGRGYLEVETPMMQVIPGGAVARPFITHHNALDMQLFLRIAPE LFLKRLVVGGFEKVYEINRNFRNEGLSTRHNPEFTMLEFYEAYADYHDLMDLTEDMLRRMAIEVLGTTQIQYQGANYDFG RPFARLSVRDAILQFNPELTAADVDDLDRLRAVVERHGVVPKATWGLGKLQVELFEQTVESRLMDPTFITRYPTEVSPLA RRNDEDPSVTDRFELFVGGREIANGFSELNDAEDQAERFRAQVAEKEAGDQEAMYYDADYVRALEHGLPPTAGEGIGIDR LVMLFTDSPSIRDVLLFPHMRPESI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-139 | 59 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-85 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Alvin_1283 | YP_003443254.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 8e-140 | 59 |
