Gene Information

Name : Alvin_1193 (Alvin_1193)
Accession : YP_003443164.1
Strain : Allochromatium vinosum DSM 180
Genome accession: NC_013851
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1380204 - 1380899 bp
Length : 696 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tgr:Tgr7_2115 ABC transporter related

DNA sequence :
ATGTCGGATCAAGCGGCCTCGGCCGTCTCGCAAGCCATTGGATTGGGGAAGCATGTTACCGGCCCGGCCGGCAGCTTGAC
CATCCTCGCCGGACTGAATCTGGAGATCCACGCCGGCGAGGCGGTCGCCATCCTCGGCGCCTCCGGCTCGGGCAAGTCGA
CCCTGCTCGGACTCCTGGCCGGACTCGACGACCCGACCGACGGTGAGGTGTGGCTGTGCGGTCGCCGGGTCGATCGTCTC
GACGAGGACGGACGCGCCGAATTGCGTGCCGGCCGGGTCGGCTTCGTGTTCCAGAATTTCCAGCTCCTGCCCACACTCAC
CGCGCGCGAGAACGTGCTGCTGCCGCTGGAGCTGACCGGCACCCCGGACGCCGCGCGCCGCGCAGACGAGGCGCTCGATC
GCGTGGGGCTGAGCGCACGCGCCGGACACTATCCGCGCCAGCTCTCGGGCGGCGAGCAGCAGCGCGTGGCCATTGCGCGC
GCCTATGCGCCCCGCCCCGCCGTGCTCTTCGCCGACGAGCCGACCGGCAACCTGGATCAGACCACGGGCGAGCACATCAT
CGACCTGTTGCTCGACTTGCGCCAGGAGACGGGCACGGGCGCGGCCCTGGTGCTGGTCACGCATGATCCGCGTCTGGCCG
AGCGCTGCGACCGGCGCTTGCGAATGCACGACGGGCGGCTGGAGCCGCTGACATGA

Protein sequence :
MSDQAASAVSQAIGLGKHVTGPAGSLTILAGLNLEIHAGEAVAILGASGSGKSTLLGLLAGLDDPTDGEVWLCGRRVDRL
DEDGRAELRAGRVGFVFQNFQLLPTLTARENVLLPLELTGTPDAARRADEALDRVGLSARAGHYPRQLSGGEQQRVAIAR
AYAPRPAVLFADEPTGNLDQTTGEHIIDLLLDLRQETGTGAALVLVTHDPRLAERCDRRLRMHDGRLEPLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-21 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-19 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-20 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-20 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alvin_1193 YP_003443164.1 ABC transporter NC_008702.1.4606598. Protein 1e-29 53
Alvin_1193 YP_003443164.1 ABC transporter NC_012469.1.7686878. Protein 6e-25 47