Gene Information

Name : Alvin_1159 (Alvin_1159)
Accession : YP_003443130.1
Strain : Allochromatium vinosum DSM 180
Genome accession: NC_013851
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 1339488 - 1341512 bp
Length : 2025 bp
Strand : +
Note : TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: sml:Smlt0407 potassium-transporting ATPase subuni

DNA sequence :
ATGAAACGTCAGCGCAACGCATTGAAGTTACTGGATGCCCAAACTCTGGTCCGCTTGGCGGGTGAGTCGCTGCGGCGGCT
CCACCCGCGCCGGCTCGCGCACAACCCGGTGATGTTCGTGGTCGGGGTCGGTACCCTGGTGACCCTGTGGCTGACCGGCA
CCGATATCATCGCTGGTCGCCCCTGGGGCTTCGATCTCGCCATCACTCTGACGCTGCTGTTCACCCTGCTCTTTGCCAAC
GCCGCCGAGGCACTGGCGGAGGCGCAGGGCCGGGCGCAGGCCGAGAGCCTGCGCTCCACACGGAAACAGCTCGTGGCCCG
GCGCGTTCGGGGGGACGATGAAGAGTCGGTGCCCGCCACCGCCCTGCGTCGCGGCGACCGGGTGCGCGTCCTGGCGGGCG
AGCTGATTCCCGCCGACGGCGAGATCATCGAGGGTGCCGCCAGCATCAACGAGTCGGCGGTCACCGGCGAATCGGCGCCG
GTACTGCGCGAGGCCGGCACCGACAACAGCGGCGTCAGCGCCGGCACCAAGCTGCTGACCGACAGCCTCCTGGTCGAGGT
GACGGTGGAGTCTGGCCAGTCGCTGCTGGATCGCATGATCGCGCTGGTGGAGAGCGCCAAGCGGCAGAAGACGCCCAACG
AGATCGCACTCACCGTGCTGCTGTCCGCGTTGACCATGGTGTTCCTGATCGTGGTGGCGACCCTGGTGCCCTTCGCCGCC
TTTGTCGGCGCCGAAGTCTCGGTACCTGTACTGGTCGCGCTCCTGGTCTGCCTGATCCCCACCACCATCGGCGGGCTGCT
GCCGGCCATCGGTATCGCCGGCATGGATCGCGCCATGCGGGCCAATCTGGTGGCCAAGTCGGGCAAGGCGGTGGAGGTGG
CCGGCAACATCGACACCCTGCTGCTGGACAAGACCGGCACCATCACTCACGGCGACCGCCAGGCCAGCGACTTTCTGCCC
TTGGCCAGGATCGCTCCTGAGCAGCTGCGCGAGGCCGCTATGCTTTCGTCACTGGCGGATCCCACGCCTGAGGGCAAATC
CATCGTTGCGCTGGCGAAGAGCCGTGGGGCGACGGCCGAGGCCGACCCCAAGGCGCGCGTCCTGGCATTTTCCGCCAAGA
CCCGCCTCTCCGGCATCGACCAGCCCGACGGCCGTCGTATCCGCAAGGGCGCACCGGATGCCATACGCCGCTTCGTCACC
GAGAATGGCGGCTCCTACCCGGATGAGACCACTGCGCTGGTGGAACGTGTGGCGCGTGGCGGCGCGACGCCGCTGGTGGT
CGCGCAGGACGATCGGGTGCTCGGCGTCGTACCCCTGTCCGACATCATCAAGACCGGCATCAAGGAACGCTTCCAGCGCC
TGCACGCCATGGGCATCCGCACGGTGCTGATCACCGGCGACAATCCGCTGACCGCCGCCGCCATCGCCGCCGAGGCCGGC
GTGGCGGACTACATCGCCGAGGCCACGCCGGAGGATAAGCTGGAGTACATCCGGCGCGAACAGGCCCAGGGACGCCTGGT
GGCCATGATGGGCGACGGCACCAACGACGCGCCCGCCCTGGCCCAGGCGGATCTGGGGCTGGCGATGAACTCCGGCACCC
AGGCCGCCAAGGAGGCGGGCAACATGGTCGACCTGGATTCCGACCCGACCAAGCTGCTGGAGGTGGTGGAGATCGGCAAG
CAGTTGCTGGTCACACGCGGTGCGCTGACGACCTTCTCACTGGCCAACGACGTGGCCAAATACTTCGCCATCCTCCCGGC
CATTTTCGTCGCCAGCGTACCGGCCATGCAGGCGCTCGACATCATGCAGCTCAACAGCCCGGCCACGGCGGTGCTGGCGG
CGGTGATCTTCAATGCCCTGGTGATCCCGGCGCTGATCCCCTTCGCCCTGCGCGGGGTGCGCCTCCGACCGGTCAGTGCC
GACGCGCTGTTGCGCCGCAACCTCTTGATCTACGGTTTGGGCGGACTGGTGCTGCCGTTCCCGGCGATCAAGCTCATCGA
TCTTGGTCTTGGCTTGGTGATGTAG

Protein sequence :
MKRQRNALKLLDAQTLVRLAGESLRRLHPRRLAHNPVMFVVGVGTLVTLWLTGTDIIAGRPWGFDLAITLTLLFTLLFAN
AAEALAEAQGRAQAESLRSTRKQLVARRVRGDDEESVPATALRRGDRVRVLAGELIPADGEIIEGAASINESAVTGESAP
VLREAGTDNSGVSAGTKLLTDSLLVEVTVESGQSLLDRMIALVESAKRQKTPNEIALTVLLSALTMVFLIVVATLVPFAA
FVGAEVSVPVLVALLVCLIPTTIGGLLPAIGIAGMDRAMRANLVAKSGKAVEVAGNIDTLLLDKTGTITHGDRQASDFLP
LARIAPEQLREAAMLSSLADPTPEGKSIVALAKSRGATAEADPKARVLAFSAKTRLSGIDQPDGRRIRKGAPDAIRRFVT
ENGGSYPDETTALVERVARGGATPLVVAQDDRVLGVVPLSDIIKTGIKERFQRLHAMGIRTVLITGDNPLTAAAIAAEAG
VADYIAEATPEDKLEYIRREQAQGRLVAMMGDGTNDAPALAQADLGLAMNSGTQAAKEAGNMVDLDSDPTKLLEVVEIGK
QLLVTRGALTTFSLANDVAKYFAILPAIFVASVPAMQALDIMQLNSPATAVLAAVIFNALVIPALIPFALRGVRLRPVSA
DALLRRNLLIYGLGGLVLPFPAIKLIDLGLGLVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 3e-147 56
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-147 56
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 6e-131 56
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-131 56
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-131 56
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-131 56
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-131 56
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 2e-131 56