Gene Information

Name : Alvin_1050 (Alvin_1050)
Accession : YP_003443021.1
Strain : Allochromatium vinosum DSM 180
Genome accession: NC_013851
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1199514 - 1200209 bp
Length : 696 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tgr:Tgr7_1479 ABC transporter related

DNA sequence : 
GTGTTCCAGGCGCGTGGACTCACCAAGATCTATGTCATGGGTGAGGTGCGGGTCGAGGCCCTGCGGGGCGTCGATCTCGA
TCTCTATCCGGGCGAACTGGTGGTGCTGCTCGGACCATCCGGCAGCGGCAAGTCGACGCTGCTCAATATCCTGGGCGGGC
TGGATTCGCCGACCGGCGGTCAGGTCATCGCCGCCGGGCGCGATCTCACACAGGCCGGCGAGCGTGAATTGACCCGGTTT
CGCCGGCAGGTCGTCGGCTTCGTCTTTCAGTTCTACAACCTGATCCCCAGTCTCACCGCGCGCGAGAACGTCGCCATCGT
CACCGAGATCGCCGAGGATCCGATGACGCCCGAAGCGGCGCTCGATCTGGTGGGACTCGGCGCGCGTCTCGATCATTTCC
CCGCTCAGCTCTCAGGCGGCGAGCAGCAGCGCGTGGCCATCGCGCGCGCCATCGCCAAGCGTCCGCGCGTGCTCCTGTGC
GACGAGCCGACCGGGGCACTGGACTCGACCACGGGCGTGCGGGTGCTGGAGGTGCTGGAGCGGGTCAATCGTGAGCTGGG
CACGACGACCGCCGTCATCACCCACAATGCCGCCATCGCGGCCATGGCTGATCGCGTGATCCTGATGGCCGATGGGCGGA
TTCAGTCGGTGCGCACCAATCCCGGGCGGGTCGCGCCGCGCGAGATCCACTGGTGA

Protein sequence : 
MFQARGLTKIYVMGEVRVEALRGVDLDLYPGELVVLLGPSGSGKSTLLNILGGLDSPTGGQVIAAGRDLTQAGERELTRF
RRQVVGFVFQFYNLIPSLTARENVAIVTEIAEDPMTPEAALDLVGLGARLDHFPAQLSGGEQQRVAIARAIAKRPRVLLC
DEPTGALDSTTGVRVLEVLERVNRELGTTTAVITHNAAIAAMADRVILMADGRIQSVRTNPGRVAPREIHW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-26 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alvin_1050 YP_003443021.1 ABC transporter NC_012469.1.7685735. Protein 4e-40 52
Alvin_1050 YP_003443021.1 ABC transporter NC_008702.1.4606598. Protein 1e-23 46
Alvin_1050 YP_003443021.1 ABC transporter CP001581.1.gene798.p Protein 6e-28 43
Alvin_1050 YP_003443021.1 ABC transporter CP001581.1.gene598.p Protein 5e-29 42