Name : Alvin_1019 (Alvin_1019) Accession : YP_003442990.1 Strain : Allochromatium vinosum DSM 180 Genome accession: NC_013851 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 1163350 - 1164117 bp Length : 768 bp Strand : + Note : KEGG: avn:Avin_14780 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase DNA sequence : ATGGACAGAGATTTCAAGGTCGTCATCCCCGCCCGCTACGGCTCGACCCGTCTGCCGGGCAAGCCATTGCTCGACATCGC CGGCAAGCCGATGATCCAGCGTGTCGTCGAGCGCGCTCGGGCCAGCGGCGCCGGCGAAGTCGTGGTCGCCACCGATGATC GGCGTATCCGCGAAGCCTGTGAAAAACTGGGGATCGCCACCGAGATGACCGCTTCGAGTCATCGCAGCGGCTCGGATCGG GTCGCCGAGGTGATCGAGCGGCGCGGCTGGAACGATGACACGATCGTCGTCAACCTCCAGGGTGACGAGCCCTGCATGCC GCCTGCGCTCATCAATCAGGTCGCGTCCAGTCTGGCCGCACGCAACGAGATCGGCCTGGCCACGCTCGCCCACCCGATCG ACGACAGCGCCACGCTCTTCGATCCGCATGTGGTCAAGGTCGTCATCGACACCGCCGGTTTTGCACTCTATTTTTCGCGC GCCCCCATCCCCTGGCATCGCGACGAGTTCCTGGGTGACAAGGCCCGGCTGCCCAAGTCGGTTGCTTTTCTTCGACACAT CGGCCTCTATGCCTATCGGGCCGCCTTCCTGAAGCGTTTCGTCACCCTGGAGCCCGCGCCGCTGGAGATCGCCGAGTCGC TCGAACAGTTGCGCGCCCTCTGGCACGGTGCGCCCATCCATGTCGGGTTGGCCGCCGAGACGCCGGGACCGGGGGTGGAT ACCCCGGATGATCTGGCGCGAGTCGTTCGGTATCTGGAAGCCATCTGA Protein sequence : MDRDFKVVIPARYGSTRLPGKPLLDIAGKPMIQRVVERARASGAGEVVVATDDRRIREACEKLGIATEMTASSHRSGSDR VAEVIERRGWNDDTIVVNLQGDEPCMPPALINQVASSLAARNEIGLATLAHPIDDSATLFDPHVVKVVIDTAGFALYFSR APIPWHRDEFLGDKARLPKSVAFLRHIGLYAYRAAFLKRFVTLEPAPLEIAESLEQLRALWHGAPIHVGLAAETPGPGVD TPDDLARVVRYLEAI |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 6e-39 | 46 |
kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 4e-39 | 46 |
kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 4e-39 | 46 |