Gene Information

Name : Kvar_0747 (Kvar_0747)
Accession : YP_003437689.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 780769 - 782286 bp
Length : 1518 bp
Strand : +
Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: kpe:KPK_0780 lysyl-tRNA synthetase

DNA sequence :
ATGTCTGAACAACAAGCACAGGGCGCTGACGCGGCAATTGACCTTAATAATGAACTGAAAACCCGCCGTGAGAAGCTGGC
CGCGCTGCGTGAGCAGGGCGTCGCTTTCCCGAACGATTTCCGTCGTGACCATACCTCTGACCAACTGCACGCTGACTTCG
ATGCGAAAGAAAACGAAGAGCTGGAAGCGCTGAACGTTGAAGTGGCCGTTGCTGGCCGCATGATGACCCGTCGTATTATG
GGTAAAGCGTCTTTCGTTACCCTGCAGGACGTGGGCGGCCGCATTCAGCTATACGTCGCGCGTGATGACCTGGCGGAAGG
CGTTTATAACGACCAGTTCAAAAAATGGGATCTTGGCGACATCATCGCCGCCCGCGGTAAGCTGTTCAAGACTAAAACCG
GCGAGCTGTCCATCCACTGCACCGAGCTGCGTCTGCTGACCAAAGCCCTGCGTCCGCTGCCGGACAAATTCCACGGCCTG
CAGGATCAGGAAGCGCGCTATCGTCAGCGTTACCTCGATCTGATCTCCAACGATGAATCTCGCAACACTTTCAAAGTGCG
TTCGCAGATCCTGGCGGGTATTCGTCAGTTCATGGTTGGCCGCGGCTTTATGGAAGTGGAAACCCCGATGATGCAGGTGA
TCCCGGGCGGTGCTTCCGCGCGTCCGTTCATCACCCATCACAATGCGCTGGATCTGGACATGTACCTGCGTATCGCGCCG
GAACTGTACCTCAAGCGTCTGGTGGTTGGCGGCTTCGAACGCGTCTTCGAGATCAACCGTAACTTCCGTAACGAAGGGAT
CTCCGTTCGTCATAACCCAGAGTTCACCATGATGGAACTCTATATGGCATACGCGGATTACAAAGATCTGATCGAGCTGA
CCGAATCCCTGTTCCGCACCCTGGCGCAGGACATCCTCGGCAACACTGAAGTGCCTTACGGCGACCAGGTGTTCGACTTC
GGCAAGCCGTTTGAAAAACTGACCATGCGCGAAGCGATCAAGAAATACCGTCCGGAAACCGAGATGGCGGATCTGGATAA
CTTCGATTCCGCGAAAGCGATCGCTGAGTCCATCGGCATTAAAGTTGAGAAGAGCTGGGGTCTGGGCCGTATCGTGACCG
AGATCTTCGAAGAAGTGGCGGAAGCGCATCTGATTCAGCCGACCTTCATCACCGAATACCCGGCGGAAGTTTCTCCGCTG
GCGCGCCGTAACGACGTGAATCCGGAAATCACCGACCGTTTCGAGTTCTTTATCGGCGGCCGTGAAATCGGTAACGGCTT
TAGCGAGCTGAACGACGCTGAAGATCAGGCGCAGCGATTCCAGGATCAGGTTGATGCGAAAGCCGCCGGCGACGACGAAG
CGATGTTCTACGACGAAGACTACGTCACCGCGCTGGAACACGGCCTGCCGCCGACCGCTGGTCTGGGTATCGGTATCGAC
CGTATGGTCATGCTGTTCACTAACAGCCACACCATCCGCGACGTGATCCTGTTCCCGGCGATGCGTCCGCAGAAATAA

Protein sequence :
MSEQQAQGADAAIDLNNELKTRREKLAALREQGVAFPNDFRRDHTSDQLHADFDAKENEELEALNVEVAVAGRMMTRRIM
GKASFVTLQDVGGRIQLYVARDDLAEGVYNDQFKKWDLGDIIAARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL
QDQEARYRQRYLDLISNDESRNTFKVRSQILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGNTEVPYGDQVFDF
GKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPL
ARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFQDQVDAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 6e-166 69
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 1e-90 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_0747 YP_003437689.1 lysyl-tRNA synthetase VFG1668 Protein 3e-166 69