Gene Information

Name : Kvar_4784 (Kvar_4784)
Accession : YP_003441687.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 5083806 - 5084135 bp
Length : 330 bp
Strand : +
Note : PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: kpu:KP1_0325 regulation of superoxide response regulon

DNA sequence : 
ATGTCCCATCAGGATATTATTCAAACACTGATTGAATGGATTGATGAACATATCGATCAACCACTTAACATTGATATAGT
CGCCAGAAAGTCAGGATACTCGAAATGGTATCTGCAGCGGATGTTCCGTACCGTAATGCATCAGACGCTGGGTGATTATA
TTCGTCAGCGCCGCCTGCTGCTGGCGGCGGAAGCGTTGCGAACCACTCAGCGACCTATCTTTGATATCGCGATGGATCTG
GGCTACGTCTCGCAGCAAACCTTCTCCCGGGTGTTCCGCCGCGAGTTCGACCGCACTCCCAGCGACTACCGCCATCAGAT
CTCCGCGTGA

Protein sequence : 
MSHQDIIQTLIEWIDEHIDQPLNIDIVARKSGYSKWYLQRMFRTVMHQTLGDYIRQRRLLLAAEALRTTQRPIFDIAMDL
GYVSQQTFSRVFRREFDRTPSDYRHQISA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 2e-35 91
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 1e-14 47
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 1e-14 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 2e-38 100
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 3e-37 93
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 6e-36 91
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator BAC0371 Protein 5e-35 89
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 5e-35 89
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 9e-35 88
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator CP001138.1.gene612.p Protein 1e-18 49
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 6e-15 47
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 1e-15 42
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator CP001918.1.gene2033. Protein 8e-16 42
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator CP001138.1.gene1637. Protein 7e-16 41
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator BAC0560 Protein 6e-16 41
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator NC_002695.1.917339.p Protein 6e-16 41
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator CP000034.1.gene1596. Protein 6e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator VFG0585 Protein 6e-36 91
Kvar_4784 YP_003441687.1 AraC family transcriptional regulator VFG1038 Protein 5e-15 47