Gene Information

Name : Kvar_4479 (Kvar_4479)
Accession : YP_003441385.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Unknown
Product : polypeptide-transport-associated domain-containing protein ShlB-type
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG2831
EC number : -
Position : 4747568 - 4749322 bp
Length : 1755 bp
Strand : -
Note : PFAM: polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: eic:NT01EI_3330 polypeptide-transport-associated domain protein ShlB-type

DNA sequence :
ATGGGTTTGGTTGTATTAAATGCCACGCTTCGCTTTTTATTACTCGACATGGAACGTTGTGACTTAACTATAATGAATAA
ATGGAATTTCGTTCATAAAGTTTTAATTATCTGTATATTGCCTGCCTGGGCATGGGCTGCGCCTGTGGATACCGTACGTG
AGCAGCAGTTCATCAACCAGCAGCAGCGCCAGCAGGCGCTGGAAAACCAGCTCGCGCCGCCGTCACCGGATATTCATTTA
TCAGCGGAAGAAATAAATACCGATGATGGTTTATTTCCCGTGGAACAACCTTGCTTTGCTATTTCTCAGGTTATTTTGCA
GGGCGCTGAAGCCTTACCGCATTGGCTTCCGCTCCAGCGCCAGACAAATAAAGCAATTGGGCGTTGTCTGGGAGGGAAGG
GCATTAATCTACTGATGGCCCAGTTGCAGAATATATTAATCGATCGCGGTTATATCACCAGCCGGATCCTTGCCCCGCAG
CAGGACTTAAAAAGCGGTGTTTTGCGCCTGGTGGTGATGCCGGGTTATATCCGTGAAGCCAGGCTTACGGAGGACAGCGA
TGATTATCTGTGGCTGGCGAGCGCGTTTCCGGCGACTGACGGGAAACTACTGGACCTGCGCGATATTGAACAGGGGCTGG
AAAACTTGCAGCGCCTGCCGACGGTACAGGCCAGCATGGAAATTATTCCGGGCGATACGCCGGGGCAAAGCGATATTGTC
ATTAACCGCCAACAGGAACGCTTCTGGCGCGTTGACGCCTCGCTCGATGATTCCGGCTCTAATGCCACCGGCCGCTATCA
GGGTAACCTGACGCTATCCCTGGATAACCCGTTAGCCTTAAGCGATCTTTTTTACCTTTCCGGCTCACATAACCTCGATG
GCAATGGCGGTAAATCCTCAAAGAACCTGACCGGCCACTATTCGATTCCGCTGGGTTACTGGCAGCTCGGATTAACCGCC
AGCCAGTATGATTACATGCAAACCGTGGCGGGGGCCAACGGCGATTACCAGTACAGCGGTAAAAGCAAGAACGTTGATTT
CCAGATGAGCCGCGTACTGCACCGGAGCGGTAGTCAGAAGACCACTCTTAGCGCCGATGTGGTAGCCCGCGAGCAGCGCA
ACTTCATTAACGACACCGAGATTGCCGTTCAGCGGCGGCAGACGGCGGCCTGGAAGCTTGGTCTGCAGCATCGCCATTAC
CTGGGCAACGCCACTCTCGATGCCGGAGTGAGCTATCAGCGCGGTACCCGCTGGTTTGGCGCTCAGCCCGCGCCGGAAGA
GCAATGGGGGGAAGCAACCGCCCTCAGCAAAATCCTGCAATTCAATGCTCAGCTCAATTTGCTTTTTGCCCTGGGCGGGC
AAAATTTTCGCTTTACCAGTCGCTATCAGCGGCAGATGAGCAGCACGCCGCTGACTTCGCCGGATATGTTTTCCATCGGC
AACCGTTGGACGGTTCGCGGCTTTGACGGCGAGCGCACCCTGACCGCCAGTCACGGCTGGTACATACGTAACGATATCGC
CTGGTCGACCCCGTTACCGGGGCAAGAGTTTTATCTGGGGGCGGATTACGGCGAAGTCGGCGGCGCGGGCAGTGAAACGC
TGGTGGGCAAACACCTCGCCGGGGGCGTGGCAGGGCTGCGCGGCCAGTACCACCGCGCCAGCTACGACCTGTTCGCCGGT
ATCCCTTTAGCCCAACCCGATGGCTTTAAAACCGATCCGGCAACTTTTGGTTTCAGCGTTAGCTGGAGCTACTGA

Protein sequence :
MGLVVLNATLRFLLLDMERCDLTIMNKWNFVHKVLIICILPAWAWAAPVDTVREQQFINQQQRQQALENQLAPPSPDIHL
SAEEINTDDGLFPVEQPCFAISQVILQGAEALPHWLPLQRQTNKAIGRCLGGKGINLLMAQLQNILIDRGYITSRILAPQ
QDLKSGVLRLVVMPGYIREARLTEDSDDYLWLASAFPATDGKLLDLRDIEQGLENLQRLPTVQASMEIIPGDTPGQSDIV
INRQQERFWRVDASLDDSGSNATGRYQGNLTLSLDNPLALSDLFYLSGSHNLDGNGGKSSKNLTGHYSIPLGYWQLGLTA
SQYDYMQTVAGANGDYQYSGKSKNVDFQMSRVLHRSGSQKTTLSADVVAREQRNFINDTEIAVQRRQTAAWKLGLQHRHY
LGNATLDAGVSYQRGTRWFGAQPAPEEQWGEATALSKILQFNAQLNLLFALGGQNFRFTSRYQRQMSSTPLTSPDMFSIG
NRWTVRGFDGERTLTASHGWYIRNDIAWSTPLPGQEFYLGADYGEVGGAGSETLVGKHLAGGVAGLRGQYHRASYDLFAG
IPLAQPDGFKTDPATFGFSVSWSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S1 AAQ19124.1 putative hemolysin activator HlyB Not tested PAI I CL3 Protein 2e-168 67
NMB1762 NP_274762.1 hemolysin activation protein HecB Not tested IHT-C Protein 3e-84 41