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Name : Kvar_4273 (Kvar_4273) Accession : YP_003441182.1 Strain : Klebsiella variicola At-22 Genome accession: NC_013850 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4512647 - 4514032 bp Length : 1386 bp Strand : + Note : PFAM: type II secretion system protein E; KEGG: kpe:KPK_4631 hypothetical protein DNA sequence : ATGAAAACAGAACAGCTGATCCCTCTCTGTCGCCGCTATCACGCCATGTTGCTGCATAGCGACGAGCAGACAATAGCCAT TGCGGTGGTCGATACCCCACCGGCGGAGCTGATGGAGGCGCTGCGCTTCGCGACGCAAAAGCGAATCGATATTGAATGCT GGAGCCAGGAACAGATGGACAAGCGTCTGCAGGCCCAGGAAAAGCAGGCGCAACTGGCGCAAAACGCGGGGCCGGAAAAT ATCGCCGAACGGGTCAACCAGATCCTCGAACAGGCTCTGCGTCAGCGGGCGTCCGATATTCATATCGAACCCACGGAAAC GCATTTACGCATCCGCCTGCGGGTCGATGGCGTCCTCCATGCCCTGCCGTTGCTGGCCCCCGAGCTGGCGGCACCGATTA TCGCGCGACTCAAGGTCATGGCCAGTCTCGATATCGCCGAGCATCGTTTACCACAGGATGGTCAGTTCGCGCTGAACCTC GGCGGACGACCGCTCTCCTTTCGCATCGCCACTCTACCCTGCCGCTATGGCGAAAAAATTGTCCTGCGTCTTCTGCATCA GGTTGACCAGGCCCTGGATCTGGAGGCCCTCGGACTCTCCTCTTCCCAGCTGGCGGCTTTTCGCCAGGCGCTTAATCAGC CGCAGGGTCTACTGCTGGTCACCGGCCCGACCGGAAGCGGTAAAACGGTGACCCTCTACAGCGCCCTGCAGGCCAGAAAC CGGGAGCAAGTGAACATCTGTAGCGTCGAGGATCCGCTGGAGATCCCCATCGCCGGGATGAATCAGACGCAAATTAATCC GCGTTCCGGGCTCACCTTTCACAGCGTACTCCGCGCCCTGTTACGCCAGGATCCGGATATTGTCATGGTAGGCGAGATTC GTGACGCCGAGACCGCTGAAATAGCCCTGAAAGCCGCCCAGACCGGCCATCTGGTGCTTTCCACCCTGCACACCAACTCC ACCAGCGAAACCCTCACCCGCCTGCAGCAGATGGGCATCGCCCGCTGGATGATATCTTCAGCGCTCTCGCTGGTTATCGC CCAGCGCCTGGTCCGCAAGCTGTGCCCCCACTGTCGGCGCAATGTCGGTAGCGCCGCCGACCTGCCGCACAGCCTGTGGC CACGCCCGCTGCCGCGCTGGCAGGCGGCTGGCTGCGATCACTGTTATCACGGTTATCACGGCAGGCTGGCGCTGTTTGAG GTCATGCCTGTCACCCCCGGGTTACGCCAGGGAATAGTCCAGGGGCTGAATGCCATTGAGATTGAATCTCTGGCGCGAGC CGCGGGGATGATGACGCTTTTTGAAAGCGGTTGTCAGGCTATCGAACAGGGGCTGACCAGCCTTGAAGAGGTGGTGCGGG TGCTGGGGATCCCCCATGGCGACTAA Protein sequence : MKTEQLIPLCRRYHAMLLHSDEQTIAIAVVDTPPAELMEALRFATQKRIDIECWSQEQMDKRLQAQEKQAQLAQNAGPEN IAERVNQILEQALRQRASDIHIEPTETHLRIRLRVDGVLHALPLLAPELAAPIIARLKVMASLDIAEHRLPQDGQFALNL GGRPLSFRIATLPCRYGEKIVLRLLHQVDQALDLEALGLSSSQLAAFRQALNQPQGLLLVTGPTGSGKTVTLYSALQARN REQVNICSVEDPLEIPIAGMNQTQINPRSGLTFHSVLRALLRQDPDIVMVGEIRDAETAEIALKAAQTGHLVLSTLHTNS TSETLTRLQQMGIARWMISSALSLVIAQRLVRKLCPHCRRNVGSAADLPHSLWPRPLPRWQAAGCDHCYHGYHGRLALFE VMPVTPGLRQGIVQGLNAIEIESLARAAGMMTLFESGCQAIEQGLTSLEEVVRVLGIPHGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-71 | 49 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-71 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Kvar_4273 | YP_003441182.1 | type II secretion system protein E | VFG2048 | Protein | 4e-73 | 50 |
| Kvar_4273 | YP_003441182.1 | type II secretion system protein E | VFG0182 | Protein | 4e-68 | 48 |
| Kvar_4273 | YP_003441182.1 | type II secretion system protein E | VFG2426 | Protein | 5e-70 | 46 |
