|
Name : Kvar_4224 (Kvar_4224) Accession : YP_003441133.1 Strain : Klebsiella variicola At-22 Genome accession: NC_013850 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 4460008 - 4461222 bp Length : 1215 bp Strand : + Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system F domain; KEGG: kpe:KPK_4578 pullulanase secretion protein PulF DNA sequence : ATGGCCCTGTTTCGCTATCAGGCACTGGACCCGCAGGGCAAAACCCGCCGCGGCGTTCAGCAGGCCGACTCCGCCCGCCA CGCCCGCCAGCTGCTGCGGGACAACGGCTGGCTGGCGCTGGAAGTGACCGCCGCCGACCCGGCGCGCCGGCTGTGGCGCG GCGGATCCCTCACCCGGCGCACCAGCGCCGGTGATTTAGCCCTGCTCACCCGCCAGCTGGCCACCCTGGTCGCCGCCGGG ATCCCGCTGGAAAAGGCGCTCGATGCCGTCGCCCAGCAGTGCGAAAAGGCGCCGCTAAGAACGTTAATGGCCGGGGTGCG CAGCAAAGTACTCGAAGGCCACTCGCTGGCGGAGGCGATGCGCGGCTATCCCGCCTGCTTCGACGGGCTGTTCTGCGCCA TGGTGGCGGCCGGCGAAACCTCCGGCCATCTCGACGGCGTGCTGAACCGGCTGGCGGACTATACCGAGCAGCGCCAGCAG CTTCGCGCCCGCCTGCTGCAGGCGATGATCTATCCCATCGTGCTGACGCTGGTCGCCATCAGCGTGATCGCCATTCTGCT CTCCACTGTGGTCCCAAAAGTCGTTGAGCAGTTTGTTCATCTGAAACAGGCCCTGCCGTTCTCCACCCGGCTGCTGATGA GCCTGAGCGATATCGTGCGCAGCGCGGGGCCCTGGCTGGTGCTGCTGTCGCTACTGGCGCTGCTGACGCTGCGTTATCTG CTGCGCCAGCCCGCCCGGCGGCTCGCCTGGGACCGGATGCTGCTGCGCCTGCCGGTCATCGGCCGCGTGGCCCGCAGCGT GAACAGCGCGCGCTACGCCCGCACCTTAAGCATTCTCAATGCCAGCGCGGTGCCGCTGCTGCTGTCGATGCGCATCAGCG CCGGCGTCCTCAGCAACGCCTGGGCGCGCAGCCAGCTGGCGGCGGCCAGCGAATCGGTACGCGAAGGCGTCAGTCTGCAT CGGGCGCTGGAATCCACCGCCCTGTTCCCGCCGATGATGCGCTACATGATCGCCAGCGGCGAGCAGAGCGGCGAGTTGAC CGCGATGCTGGAGCGCGCGGCGGAGAACCAGGACCGGGAGCTGAGCGCGCAGATCCAGATGGCCCTCAGTCTGTTTGAAC CCCTGCTGGTGGTCACCATGGCCGGCATGGTGCTGTTTATCGTGCTGGCTATCCTGCAGCCGATCCTGCAACTGAACACC CTTATGAGTATGTAA Protein sequence : MALFRYQALDPQGKTRRGVQQADSARHARQLLRDNGWLALEVTAADPARRLWRGGSLTRRTSAGDLALLTRQLATLVAAG IPLEKALDAVAQQCEKAPLRTLMAGVRSKVLEGHSLAEAMRGYPACFDGLFCAMVAAGETSGHLDGVLNRLADYTEQRQQ LRARLLQAMIYPIVLTLVAISVIAILLSTVVPKVVEQFVHLKQALPFSTRLLMSLSDIVRSAGPWLVLLSLLALLTLRYL LRQPARRLAWDRMLLRLPVIGRVARSVNSARYARTLSILNASAVPLLLSMRISAGVLSNAWARSQLAAASESVREGVSLH RALESTALFPPMMRYMIASGEQSGELTAMLERAAENQDRELSAQIQMALSLFEPLLVVTMAGMVLFIVLAILQPILQLNT LMSM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-94 | 57 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-94 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Kvar_4224 | YP_003441133.1 | general secretion pathway protein F | VFG2049 | Protein | 5e-89 | 56 |
| Kvar_4224 | YP_003441133.1 | general secretion pathway protein F | VFG0181 | Protein | 5e-78 | 49 |
| Kvar_4224 | YP_003441133.1 | general secretion pathway protein F | VFG1870 | Protein | 3e-77 | 43 |
