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Name : Kvar_4222 (Kvar_4222) Accession : YP_003441131.1 Strain : Klebsiella variicola At-22 Genome accession: NC_013850 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 4456561 - 4458516 bp Length : 1956 bp Strand : + Note : TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: kpe:KPK_4576 pullulanase secretion envelope protein PulD DNA sequence : ATGCTGACTGTGCTGCTGATATTAACGCCGCTGCTATTTCGTCCGGCCATCGCAGAAGAATTTTCCGCCAGCTTTAAAGG CACCGATATCCAGGAATTTATCAATACCGTCAGCAAAAACCTGAATAAAACGGTGATTATCGATCCCAGCGTGCGCGGCA CCATTACCGTACGCAGTTACGATATGCTCAATGAAGAGCAATATTATCAATTCTTCCTTAGCGTGCTGGATGTGTATGGC TTCGCCGTGATCAATATGAATAACGGCGTACTGAAGGTGGTGCGGGCTAAAGATGCGAAAACCTCGGCCGTCCCAGTCGC CAGCGAGGCAGCACCGGGCGAAGGCGATGAAGTGGTCACCCGGGTGGTGCCCCTGACCAACGTCGCCGCCCGCGATCTCG CCCCGCTGCTTCGCCAGCTGAACGATAACGCCGGCGCCGGCAGCGTGGTCCATTATGAGCCCTCCAACGTATTGCTGATG ACCGGCCGCGCAGCGGTCATCAAACGCCTGCTGACCATTGTCGAGCGCGTCGACAACGCCGGGGATCGCAGCGTGGTGAC CGTTCCCCTCTCCTGGGCCTCCGCCGCGGAGGTGGTCAAACTGGTTACCGAGCTCAATAAAGACAGCAGTAAGTCGGCGC TGCCGGGCTCGATGGTGGCGAACGTGGTGGCCGATGAGCGCACCAACGCGGTACTGGTCAGCGGCGAGCCGAACTCGCGC CAGCGCATTATCGCCATGATCAAACAGCTCGACCGCCAGCAGGCGGTGCAGGGCAACACCAAAGTGATCTACCTGAAGTA CGCCAAAGCCGCCGATCTGGTGGAGGTCCTCACCGGGATCAGCAGCTCACTGCAGAACGATAAGCAAAGCGCCAAACCGG TGGCCGCGATCGACAAAAATATCATTATCAAAGCCCACGGCCAGACCAACGCCCTGATCGTCACCGCGGCGCCGGACGTG ATGAACGATCTTGAGCGAGTGATCGCCCAGCTCGATATCCGCCGCCCGCAGGTGCTGGTGGAGGCGATTATCGCCGAAGT GCAGGATGCCGACGGCCTCAACCTCGGTATCCAGTGGGCCAATAAAAATGCCGGCATGACCCAGTTCACCAACAGCGGGC TGCCGATCTCCACGGTTATCGCTGGCGCCAACCAATACAACAAAGACGGTACCGTCAGCAGCTCGCTGGCCAGCGCTCTG GGCTCGTTTAACGGTATCGCCGCCGGCTTCTATCAGGGGAACTGGGCGATGCTGCTCACCGCTCTCTCCAGCAGTACCAA GAACGATATTCTGGCCACTCCCAGCATCGTCACCCTCGACAACATGCAAGCCACCTTTAACGTCGGCCAGGAAGTTCCGG TATTAACCGGCTCGCAAACCACCTCCGGCGACAACATCTTTAATACCGTCGAGCGCAAAACCGTCGGCATTAAGCTGAAG GTGAAACCGCAGATTAACGAAGGCGATGCCGTGCTGCTGGAGATTGAGCAGGAGGTATCGAGCGTCGCCGACTCGGCCTC CAGCACCAGTAGCGATCTCGGCGCGACCTTCAATACCCGGACGGTGAATAACGCCGTGCTGGTCGGCAGCGGTGAAACGG TGGTGGTTGGCGGGCTGCTGGATAAAAGCGTCACCGATACCGCCGACAAAGTGCCGCTGCTCGGCGACATCCCGGTGATC GGCGCCCTGTTCCGCTCCGAGAGCAAGAAAGTGTCGAAACGCAACCTGATGCTGTTTATCCGTCCGACCATCATTCGCGA TCGTGATGAGTACCGTCAGGCCTCTTCCGGCCAGTACACCGCATTCGACAATGCGCAAACCAAACAGCGGGGCAAAGACA GCAGCGAAGCGACACTCAGTAATGACCTGCTGCACATCTATCCAAAGCAGGAGACCCAGGCCTTCCGCCAGGTCAGCGCC GCCATTGACGCCTTTAACCTCGGAGGCCGTCCATGA Protein sequence : MLTVLLILTPLLFRPAIAEEFSASFKGTDIQEFINTVSKNLNKTVIIDPSVRGTITVRSYDMLNEEQYYQFFLSVLDVYG FAVINMNNGVLKVVRAKDAKTSAVPVASEAAPGEGDEVVTRVVPLTNVAARDLAPLLRQLNDNAGAGSVVHYEPSNVLLM TGRAAVIKRLLTIVERVDNAGDRSVVTVPLSWASAAEVVKLVTELNKDSSKSALPGSMVANVVADERTNAVLVSGEPNSR QRIIAMIKQLDRQQAVQGNTKVIYLKYAKAADLVEVLTGISSSLQNDKQSAKPVAAIDKNIIIKAHGQTNALIVTAAPDV MNDLERVIAQLDIRRPQVLVEAIIAEVQDADGLNLGIQWANKNAGMTQFTNSGLPISTVIAGANQYNKDGTVSSSLASAL GSFNGIAAGFYQGNWAMLLTALSSSTKNDILATPSIVTLDNMQATFNVGQEVPVLTGSQTTSGDNIFNTVERKTVGIKLK VKPQINEGDAVLLEIEQEVSSVADSASSTSSDLGATFNTRTVNNAVLVGSGETVVVGGLLDKSVTDTADKVPLLGDIPVI GALFRSESKKVSKRNLMLFIRPTIIRDRDEYRQASSGQYTAFDNAQTKQRGKDSSEATLSNDLLHIYPKQETQAFRQVSA AIDAFNLGGRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-126 | 47 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 5e-134 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Kvar_4222 | YP_003441131.1 | general secretion pathway protein D | VFG2047 | Protein | 8e-124 | 46 |
