Gene Information

Name : Kvar_3880 (Kvar_3880)
Accession : YP_003440792.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Virulence
Product : arginine/ornithine antiporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 4087402 - 4088736 bp
Length : 1335 bp
Strand : -
Note : TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region; KEGG: kpe:KPK_4093 lysine/cadaverine antiporter

DNA sequence :
ATGAGTTCTGCCAAGAAGATCGGGCTATTTGCCTGTACCGGTGTCGTCGCCGGTAATATGATGGGGAGCGGTATTGCATT
ATTACCTGCGAACCTGGCCAGCATCGGTGGTATTGCCATTTGGGGCTGGGTAATTTCAATTATTGGTGCGATGTCTCTGG
CTTATGTTTATGCCCGACTGGCCACTAAGAACCCGCAACAGGGTGGTCCAATTGCCTACGCCGGGGAAATATCTCCCGCA
TTCGGTTTCCAGACCGGTGTGCTTTATTATCATGCAAACTGGATTGGTAACCTGGCCATCGGGATTACCGCAGTTTCTTA
TCTCTCAACGTTCTTCCCAATTTTAAATAACCCGGTGCCAGCAGGTATTGCCTGTATTGCCATCGTGTGGATCTTTACTT
TCGTTAATATGCTCGGCGGGACCTGGGTCAGCCGTCTGACCACTATTGGTCTGGTACTGGTGCTTATTCCAGTGGTCATG
ACCGCGGTTGTCGGCTGGCACTGGTTTGATGTCGCCACCTATCAGGCGAACTGGAACACCTCCAGCACCACCGATAGCCA
CGCGGTCATTAAAAGTATCCTGCTCTGCCTGTGGGCCTTTGTTGGCGTCGAATCCGCCGCCGTGAGTACCGGGATGGTGA
AAAACCCGAAACGTACCGTACCGCTGGCAACCATGCTGGGTACTGCGATGGCCGGTATCGTCTATATCGCCGCGACTCAG
GTTATCGCCGGTATGTATCCTGCTTCTCAGATGGCCGCGTCCGGTGCGCCGTTCGCGATTAGCGCCTCTACCATTCTCGG
CGGCTGGGCTGCTCCGATGGTTTCCGCTTTCACTGCCTTCGCTTGCCTGACTTCTCTGGGCTCGTGGATGATGCTGGTTG
GCCAGGCCGGTGTACGTGCCGCCAACGACGGTAACTTCCCGAAAGTGTATGGCGAAGTCGATAGCAACGGTATCCCGAAA
AAAGGCCTGCTGCTGGCGGCGGTGAAAATGACCGCGCTGATGGTGCTGATTACCCTGATGAACTCCGCCGGTGGTAAAGC
TTCTGACCTGTTCGGCGAACTGACCGGTATCGCGGTACTGCTGACCATGCTGCCTTACTTCTACTCCTGTGTTGACCTGA
TTCGTTTCGAAGGCATCAACATTCGTAACTTCGTTAGCCTGATTTGTTCGGTACTGGGTTGCGTGTTCTGCTTCATCGCG
CTGATGGGCGCAAGCTCCTTCGAACTGGCCGGCACCTTTATCGTTAGCCTGATTATCCTGATGTTCTACGGTCGCAAAAT
GCACCAGCGCCAGAACAACGCAACGGATAACAACAGCCCCGCTAACGCGCACTAA

Protein sequence :
MSSAKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWVISIIGAMSLAYVYARLATKNPQQGGPIAYAGEISPA
FGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPILNNPVPAGIACIAIVWIFTFVNMLGGTWVSRLTTIGLVLVLIPVVM
TAVVGWHWFDVATYQANWNTSSTTDSHAVIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTAMAGIVYIAATQ
VIAGMYPASQMAASGAPFAISASTILGGWAAPMVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGEVDSNGIPK
KGLLLAAVKMTALMVLITLMNSAGGKASDLFGELTGIAVLLTMLPYFYSCVDLIRFEGINIRNFVSLICSVLGCVFCFIA
LMGASSFELAGTFIVSLIILMFYGRKMHQRQNNATDNNSPANAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 0.0 94
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 0.0 94
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 4e-145 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_3880 YP_003440792.1 arginine/ornithine antiporter VFG1671 Protein 2e-145 68