Gene Information

Name : Kvar_3818 (Kvar_3818)
Accession : YP_003440730.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG4977
EC number : -
Position : 4019748 - 4020089 bp
Length : 342 bp
Strand : -
Note : PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: kpu:KP1_1492 regulatory protein

DNA sequence : 
ATGACGATTTCCGCTCAGGTGATTGACACTATCGTCGAGTGGATTGATGACAACCTGCATCAACCGCTGCGTATTGATGA
TATCGCTCGCCATGCCGGGTATTCGAAATGGCATCTGCAACGGCTGTTTTTACAGTACAAGGGAGAGAGCCTTGGGCGCT
ATATTCGTGAAAGGAAGCTGCTGCTGGCCGCCCGCGATCTGCGCGACACCGATCAGCGGGTCTACGATATCTGCCTGAAG
TATGGCTTCGATTCGCAACAGACCTTTACCCGCGTCTTCACCCGGACCTTCAACCAGCCGCCGGGCGCCTACCGCAAAGA
AAACCACAGCCGCGCCCACTGA

Protein sequence : 
MTISAQVIDTIVEWIDDNLHQPLRIDDIARHAGYSKWHLQRLFLQYKGESLGRYIRERKLLLAARDLRDTDQRVYDICLK
YGFDSQQTFTRVFTRTFNQPPGAYRKENHSRAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 1e-15 52
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 5e-14 48
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 5e-14 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator CP001138.1.gene612.p Protein 3e-36 92
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 4e-16 52
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 4e-16 51
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 5e-16 51
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator BAC0371 Protein 5e-15 49
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 5e-15 49
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 9e-15 48
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 2e-14 48
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 3e-15 47
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator CP001918.1.gene2033. Protein 2e-15 46
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator CP001138.1.gene1637. Protein 1e-15 45
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator NC_002695.1.917339.p Protein 5e-16 44
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator BAC0560 Protein 5e-16 44
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator CP000034.1.gene1596. Protein 5e-16 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator VFG0585 Protein 4e-16 52
Kvar_3818 YP_003440730.1 AraC family transcriptional regulator VFG1038 Protein 2e-14 48