Gene Information

Name : Kvar_3272 (Kvar_3272)
Accession : YP_003440185.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1629
EC number : -
Position : 3404294 - 3406483 bp
Length : 2190 bp
Strand : +
Note : TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: kpe:KPK_3447 ferric aerobactin receptor

DNA sequence :
ATGAAAAAGCGCCTCTGGGTGCTCCACCCCCTGCTGCTGGTCAGCTCGCTGCCTGCGCTGGCGGCTCAGTCTGATGAAGA
CAGCATCATCGTTAGTGCAAACCGCACCCATCGCACCGTGGCCGAAATGGCCCAAACCACCTGGGTCATTGAGGGCCAGG
AGATTGAGCAGCAGGTCCAGGGCGGGAAAGAGTTCAAAGACGTGCTGGCGCAGCTGATCCCGGGCATCGATGTCAGCAGC
CAGGGGCGCACCAATTACGGGATGAACATGCGCGGGCGCGCCATCGTCGTGCTGATCGACGGCGTCCGGCTCAATTCCTC
ACGCACCGACAGTCGCCAGCTCGACGCCATCGACCCCTTTAACATCGAACATATCGAAGTGATCTCCGGGGCGACCTCGC
TGTACGGCGGAGGCAGTACCGGCGGGCTTATCAACATCGTCACCAAGAAAGGGCAGCAGGATCGCCAGGTCGATCTCGAG
GTGGGCAGCAAGAGCGGGTTTGCGAACAGTAACGATCACGATGAGCGCATCGCGGCGGCCGTCAGCGGCGGGACAGACCA
TGCATCCGGGCGCTTATCGGTAGCCTATCAGCGTTTCGGCGGCTGGTACGATGGCAATAACGATGCGCTGATCCTCGATA
ACACCCAAACGGGGCTCCAGCACTCTGACCGCCTCGACGTGATGGGGACGGGGACGATTGAGATCGATGACAATCGCCAG
CTGCAGCTTGTCACCCAGTATTATAAAAGCCAGGGCGATGATGACTACGGCCTGTGGCTCGGGAAGAACATGTCCGCGGT
CACCAGCGGCGGCAAAGCGTACACCACCGACGGGCTCAATTCCGACCGTATCCCCGGCACTGAGCGCCACCTGATCAGCC
TCCAGTACTCCGATGCTGACTTCTTCGGCCAGAATCTGGTGAGCCAGGTGTACTATCGCGATGAGTCCCTCACCTTCTAT
CCGTTCCCGACGCTTACGAAAGGCCAGGTCAGTAGCTTCTCCTCGTCGCAGCAGGATACCGATCAGTATGGCGCAAAGCT
GACCCTCAACAGCCAGCCGCTGGCGGGATGGGATCTTACCTGGGGTCTCGACGCCGATCATGAGACCTTCAATGCCAACC
AGATGTTCTTCGATCTGCAGCAATCGCTGGCGTCCGGCGGGCTGCATAACGAATCGATCTACACCACCGGCCGCTATCCG
GGATACAGCATCTCCAACGTCGCGCCGTTCCTGCAGTCCAGCTACGATCTGAACGAGATCTTTACCGTCAGCGGTGGGGT
ACGCTACCAGTGGACCGAAAACCGGGTTGACGACTTTGTCGGCTACGCCCAGCAACAGGATATCGCCAACGGCAAAGCGC
GCTCCGCCGACGCCATCAAAGGCGGCAAAACCGATTACGATAACTTCCTGTTTAACGCCGGGATCGTGGCGCATCTGACC
GAGCGTCAGCAGACCTGGTTTAACTTCTCGCAGGGCGTCGAGCTGCCGGACCCCGGTAAATACTACGGCATCGGTAAATA
CGGCGCGGCGGTCAATGGCCATCTGCCGCTGATCTCCAGCGTCAATGTCGATGACTCGCCGCTGCAGGGGATCAAAGTTA
ATTCGTATGAGCTGGGCTGGCGCTACACCGGCGATAACCTGCGCACCCAGCTGGCGGCGTATTACTCGACTTCGGATAAG
ACCATCGTCGTCAACCGCACCGACATGACCATCGACGTTCAGTCCGACAAACGGCGTATTTACGGCGTTGAGGGAGCGGT
CGATTTCTTTATTCCGGACAGCGACTGGAGCGTCGGCGGTAACTTCAACGTGCTGAAATCACAGGTGCAGACCGACGGCC
GCTGGCAAAAATGGGATGTCACCCTCGCCTCACCGTCCAAAGCCACCGCCTGGGTGGGTTGGGCGCCGGATCCGTGGAGC
CTGCGCGTGCAGAGCCAGCAGGTGTTTGACCTCAGCGACGCCGCCGGTAACAAGCTGGAAGGCTATAACACCGTTGATTT
TATTGGCAGTTACGCGCTGCCGGTGGGGAAACTGACCTTCAGTATCGAAAACCTGCTTAACGAAGACTATGTCACCATCT
GGGGCCAGCGGGCGCCGCTGCTCTACAGCCCGACCTACGGCAGTTCATCGCTGTACGAATACAAAGGCCGTGGCCGTACC
TTCGGTCTGAATTACGCGTTAACCTTCTGA

Protein sequence :
MKKRLWVLHPLLLVSSLPALAAQSDEDSIIVSANRTHRTVAEMAQTTWVIEGQEIEQQVQGGKEFKDVLAQLIPGIDVSS
QGRTNYGMNMRGRAIVVLIDGVRLNSSRTDSRQLDAIDPFNIEHIEVISGATSLYGGGSTGGLINIVTKKGQQDRQVDLE
VGSKSGFANSNDHDERIAAAVSGGTDHASGRLSVAYQRFGGWYDGNNDALILDNTQTGLQHSDRLDVMGTGTIEIDDNRQ
LQLVTQYYKSQGDDDYGLWLGKNMSAVTSGGKAYTTDGLNSDRIPGTERHLISLQYSDADFFGQNLVSQVYYRDESLTFY
PFPTLTKGQVSSFSSSQQDTDQYGAKLTLNSQPLAGWDLTWGLDADHETFNANQMFFDLQQSLASGGLHNESIYTTGRYP
GYSISNVAPFLQSSYDLNEIFTVSGGVRYQWTENRVDDFVGYAQQQDIANGKARSADAIKGGKTDYDNFLFNAGIVAHLT
ERQQTWFNFSQGVELPDPGKYYGIGKYGAAVNGHLPLISSVNVDDSPLQGIKVNSYELGWRYTGDNLRTQLAAYYSTSDK
TIVVNRTDMTIDVQSDKRRIYGVEGAVDFFIPDSDWSVGGNFNVLKSQVQTDGRWQKWDVTLASPSKATAWVGWAPDPWS
LRVQSQQVFDLSDAAGNKLEGYNTVDFIGSYALPVGKLTFSIENLLNEDYVTIWGQRAPLLYSPTYGSSSLYEYKGRGRT
FGLNYALTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 0.0 74
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 0.0 74
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 0.0 74
iutA AAK71635.1 IutA Virulence SHI-3 Protein 0.0 73
iutA AAD44750.1 IutA Virulence SHI-2 Protein 0.0 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_3272 YP_003440185.1 TonB-dependent siderophore receptor VFG0619 Protein 0.0 74
Kvar_3272 YP_003440185.1 TonB-dependent siderophore receptor VFG0936 Protein 0.0 74
Kvar_3272 YP_003440185.1 TonB-dependent siderophore receptor VFG1085 Protein 0.0 73